#include <SETissueSystem.h>

Inheritance diagram for biogears::SETissueSystem:

Public Member Functions
	SETissueSystem (Logger *logger)

	~SETissueSystem () override

const char *	classname () const override

size_t	hash_code () const override

void	Clear () override

const SEScalar *	GetScalar (const char *name) override

const SEScalar *	GetScalar (const std::string &name) override

bool	Load (const CDM::TissueSystemData &in)

CDM::TissueSystemData *	Unload () const override

Tree< const char * >	GetPhysiologyRequestGraph () const override

bool	HasCarbonDioxideProductionRate () const

SEScalarVolumePerTime &	GetCarbonDioxideProductionRate ()

double	GetCarbonDioxideProductionRate (const VolumePerTimeUnit &unit) const

bool	HasDehydrationFraction () const

SEScalar0To1 &	GetDehydrationFraction ()

double	GetDehydrationFraction () const

bool	HasExtracellularFluidVolume () const

SEScalarVolume &	GetExtracellularFluidVolume ()

double	GetExtracellularFluidVolume (const VolumeUnit &unit) const

bool	HasExtravascularFluidVolume () const

SEScalarVolume &	GetExtravascularFluidVolume ()

double	GetExtravascularFluidVolume (const VolumeUnit &unit) const

bool	HasIntracellularFluidVolume () const

SEScalarVolume &	GetIntracellularFluidVolume ()

double	GetIntracellularFluidVolume (const VolumeUnit &unit) const

bool	HasTotalBodyFluidVolume () const

SEScalarVolume &	GetTotalBodyFluidVolume ()

double	GetTotalBodyFluidVolume (const VolumeUnit &unit) const

bool	HasIntracellularFluidPH () const

SEScalar &	GetIntracellularFluidPH ()

double	GetIntracellularFluidPH () const

bool	HasOxygenConsumptionRate () const

SEScalarVolumePerTime &	GetOxygenConsumptionRate ()

double	GetOxygenConsumptionRate (const VolumePerTimeUnit &unit) const

bool	HasRespiratoryExchangeRatio () const

SEScalar &	GetRespiratoryExchangeRatio ()

double	GetRespiratoryExchangeRatio () const

bool	HasLiverInsulinSetPoint () const

SEScalarAmountPerVolume &	GetLiverInsulinSetPoint ()

double	GetLiverInsulinSetPoint (const AmountPerVolumeUnit &unit) const

bool	HasLiverGlucagonSetPoint () const

SEScalarMassPerVolume &	GetLiverGlucagonSetPoint ()

double	GetLiverGlucagonSetPoint (const MassPerVolumeUnit &unit) const

bool	HasMuscleInsulinSetPoint () const

SEScalarAmountPerVolume &	GetMuscleInsulinSetPoint ()

double	GetMuscleInsulinSetPoint (const AmountPerVolumeUnit &unit) const

bool	HasMuscleGlucagonSetPoint () const

SEScalarMassPerVolume &	GetMuscleGlucagonSetPoint ()

double	GetMuscleGlucagonSetPoint (const MassPerVolumeUnit &unit) const

bool	HasFatInsulinSetPoint () const

SEScalarAmountPerVolume &	GetFatInsulinSetPoint ()

double	GetFatInsulinSetPoint (const AmountPerVolumeUnit &unit) const

bool	HasFatGlucagonSetPoint () const

SEScalarMassPerVolume &	GetFatGlucagonSetPoint ()

double	GetFatGlucagonSetPoint (const MassPerVolumeUnit &unit) const

bool	HasLiverGlycogen () const

SEScalarMass &	GetLiverGlycogen ()

double	GetLiverGlycogen (const MassUnit &unit) const

bool	HasMuscleGlycogen () const

SEScalarMass &	GetMuscleGlycogen ()

double	GetMuscleGlycogen (const MassUnit &unit) const

bool	HasStoredProtein () const

SEScalarMass &	GetStoredProtein ()

double	GetStoredProtein (const MassUnit &unit) const

bool	HasStoredFat () const

SEScalarMass &	GetStoredFat ()

double	GetStoredFat (const MassUnit &unit) const

Public Member Functions inherited from biogears::SESystem
	SESystem (Logger *logger)

virtual	~SESystem ()

bool	Load (const CDM::SystemData &in)

Public Member Functions inherited from biogears::Loggable
	Loggable ()

	Loggable (Logger *log)

virtual	~Loggable ()

virtual Logger *	GetLogger () const

Static Public Member Functions
static size_t	TypeHash ()

static constexpr char const *const	TypeTag ()

Static Public Member Functions inherited from biogears::SESystem
static const SEScalar *	GetScalar (const char name, std::vector< SESystem > *systems)

static const SEScalar *	GetScalar (const std::string &name, std::vector< SESystem * > *systems)

Protected Member Functions
void	Unload (CDM::TissueSystemData &data) const

Protected Member Functions inherited from biogears::SESystem
void	Unload (CDM::SystemData &data) const

Protected Member Functions inherited from biogears::Loggable
virtual void	Debug (const char msg, const char origin="") const

virtual void	Debug (const std::string &msg, const std::string &origin=empty) const

virtual void	Debug (std::ostream &msg, const std::string &origin=empty) const

virtual void	Info (const char msg, const char origin="") const

virtual void	Info (const std::string &msg, const std::string &origin=empty) const

virtual void	Info (std::ostream &msg, const std::string &origin=empty) const

virtual void	Warning (const char msg, const char origin="") const

virtual void	Warning (const std::string &msg, const std::string &origin=empty) const

virtual void	Warning (std::ostream &msg, const std::string &origin=empty) const

virtual void	Error (const char msg, const char origin="") const

virtual void	Error (const std::string msg, const std::string origin=empty) const

virtual void	Error (std::ostream &msg, const std::string &origin=empty) const

virtual void	Fatal (const char msg, const char origin="") const

virtual void	Fatal (const std::string &msg, const std::string &origin=empty) const

virtual void	Fatal (std::ostream &msg, const std::string &origin=empty) const

Protected Attributes
SEScalarVolumePerTime *	m_CarbonDioxideProductionRate

SEScalar0To1 *	m_DehydrationFraction

SEScalarVolume *	m_ExtracellularFluidVolume

SEScalarVolume *	m_ExtravascularFluidVolume

SEScalarVolume *	m_IntracellularFluidVolume

SEScalarVolume *	m_TotalBodyFluidVolume

SEScalar *	m_IntracellularFluidPH

SEScalarVolumePerTime *	m_OxygenConsumptionRate

SEScalar *	m_RespiratoryExchangeRatio

SEScalarAmountPerVolume *	m_LiverInsulinSetPoint

SEScalarMassPerVolume *	m_LiverGlucagonSetPoint

SEScalarAmountPerVolume *	m_MuscleInsulinSetPoint

SEScalarMassPerVolume *	m_MuscleGlucagonSetPoint

SEScalarAmountPerVolume *	m_FatInsulinSetPoint

SEScalarMassPerVolume *	m_FatGlucagonSetPoint

SEScalarMass *	m_LiverGlycogen

SEScalarMass *	m_MuscleGlycogen

SEScalarMass *	m_StoredProtein

SEScalarMass *	m_StoredFat

Protected Attributes inherited from biogears::SESystem
std::stringstream	m_ss

Protected Attributes inherited from biogears::Loggable
Logger *	m_Logger

Additional Inherited Members
Static Public Attributes inherited from biogears::Loggable
static const std::string	empty

static const char *	empty_cStr

Constructor & Destructor Documentation

biogears::SETissueSystem::SETissueSystem ( Logger * logger )

biogears::SETissueSystem::~SETissueSystem ( )

override

Member Function Documentation

const char* biogears::SETissueSystem::classname ( ) const

inlineoverridevirtual

Implements biogears::SESystem.

Reimplemented in biogears::Tissue.

void biogears::SETissueSystem::Clear ( )

overridevirtual

Reimplemented from biogears::SESystem.

Reimplemented in biogears::Tissue.

SEScalarVolumePerTime & biogears::SETissueSystem::GetCarbonDioxideProductionRate ( )

double biogears::SETissueSystem::GetCarbonDioxideProductionRate ( const VolumePerTimeUnit & unit ) const

SEScalar0To1 & biogears::SETissueSystem::GetDehydrationFraction ( )

double biogears::SETissueSystem::GetDehydrationFraction ( ) const

SEScalarVolume & biogears::SETissueSystem::GetExtracellularFluidVolume ( )

double biogears::SETissueSystem::GetExtracellularFluidVolume ( const VolumeUnit & unit ) const

SEScalarVolume & biogears::SETissueSystem::GetExtravascularFluidVolume ( )

double biogears::SETissueSystem::GetExtravascularFluidVolume ( const VolumeUnit & unit ) const

SEScalarMassPerVolume & biogears::SETissueSystem::GetFatGlucagonSetPoint ( )

double biogears::SETissueSystem::GetFatGlucagonSetPoint ( const MassPerVolumeUnit & unit ) const

SEScalarAmountPerVolume & biogears::SETissueSystem::GetFatInsulinSetPoint ( )

double biogears::SETissueSystem::GetFatInsulinSetPoint ( const AmountPerVolumeUnit & unit ) const

SEScalar & biogears::SETissueSystem::GetIntracellularFluidPH ( )

double biogears::SETissueSystem::GetIntracellularFluidPH ( ) const

SEScalarVolume & biogears::SETissueSystem::GetIntracellularFluidVolume ( )

double biogears::SETissueSystem::GetIntracellularFluidVolume ( const VolumeUnit & unit ) const

SEScalarMassPerVolume & biogears::SETissueSystem::GetLiverGlucagonSetPoint ( )

double biogears::SETissueSystem::GetLiverGlucagonSetPoint ( const MassPerVolumeUnit & unit ) const

SEScalarMass & biogears::SETissueSystem::GetLiverGlycogen ( )

double biogears::SETissueSystem::GetLiverGlycogen ( const MassUnit & unit ) const

SEScalarAmountPerVolume & biogears::SETissueSystem::GetLiverInsulinSetPoint ( )

double biogears::SETissueSystem::GetLiverInsulinSetPoint ( const AmountPerVolumeUnit & unit ) const

SEScalarMassPerVolume & biogears::SETissueSystem::GetMuscleGlucagonSetPoint ( )

double biogears::SETissueSystem::GetMuscleGlucagonSetPoint ( const MassPerVolumeUnit & unit ) const

SEScalarMass & biogears::SETissueSystem::GetMuscleGlycogen ( )

double biogears::SETissueSystem::GetMuscleGlycogen ( const MassUnit & unit ) const

SEScalarAmountPerVolume & biogears::SETissueSystem::GetMuscleInsulinSetPoint ( )

double biogears::SETissueSystem::GetMuscleInsulinSetPoint ( const AmountPerVolumeUnit & unit ) const

SEScalarVolumePerTime & biogears::SETissueSystem::GetOxygenConsumptionRate ( )

double biogears::SETissueSystem::GetOxygenConsumptionRate ( const VolumePerTimeUnit & unit ) const

Tree< const char * > biogears::SETissueSystem::GetPhysiologyRequestGraph ( ) const

overridevirtual

Implements biogears::SESystem.

SEScalar & biogears::SETissueSystem::GetRespiratoryExchangeRatio ( )

double biogears::SETissueSystem::GetRespiratoryExchangeRatio ( ) const

const SEScalar * biogears::SETissueSystem::GetScalar ( const char * name )

overridevirtual

Implements biogears::SESystem.

const SEScalar * biogears::SETissueSystem::GetScalar ( const std::string & name )

overridevirtual

Implements biogears::SESystem.

SEScalarMass & biogears::SETissueSystem::GetStoredFat ( )

double biogears::SETissueSystem::GetStoredFat ( const MassUnit & unit ) const

SEScalarMass & biogears::SETissueSystem::GetStoredProtein ( )

double biogears::SETissueSystem::GetStoredProtein ( const MassUnit & unit ) const

SEScalarVolume & biogears::SETissueSystem::GetTotalBodyFluidVolume ( )

double biogears::SETissueSystem::GetTotalBodyFluidVolume ( const VolumeUnit & unit ) const

bool biogears::SETissueSystem::HasCarbonDioxideProductionRate ( ) const

bool biogears::SETissueSystem::HasDehydrationFraction ( ) const

bool biogears::SETissueSystem::HasExtracellularFluidVolume ( ) const

bool biogears::SETissueSystem::HasExtravascularFluidVolume ( ) const

bool biogears::SETissueSystem::HasFatGlucagonSetPoint ( ) const

bool biogears::SETissueSystem::HasFatInsulinSetPoint ( ) const

size_t biogears::SETissueSystem::hash_code ( ) const

inlineoverridevirtual

Implements biogears::SESystem.

Reimplemented in biogears::Tissue.

bool biogears::SETissueSystem::HasIntracellularFluidPH ( ) const

bool biogears::SETissueSystem::HasIntracellularFluidVolume ( ) const

bool biogears::SETissueSystem::HasLiverGlucagonSetPoint ( ) const

bool biogears::SETissueSystem::HasLiverGlycogen ( ) const

bool biogears::SETissueSystem::HasLiverInsulinSetPoint ( ) const

bool biogears::SETissueSystem::HasMuscleGlucagonSetPoint ( ) const

bool biogears::SETissueSystem::HasMuscleGlycogen ( ) const

bool biogears::SETissueSystem::HasMuscleInsulinSetPoint ( ) const

bool biogears::SETissueSystem::HasOxygenConsumptionRate ( ) const

bool biogears::SETissueSystem::HasRespiratoryExchangeRatio ( ) const

bool biogears::SETissueSystem::HasStoredFat ( ) const

bool biogears::SETissueSystem::HasStoredProtein ( ) const

bool biogears::SETissueSystem::HasTotalBodyFluidVolume ( ) const

bool biogears::SETissueSystem::Load ( const CDM::TissueSystemData & in )

static size_t biogears::SETissueSystem::TypeHash ( )

inlinestatic

static constexpr char const* const biogears::SETissueSystem::TypeTag ( )

inlinestatic

CDM::TissueSystemData * biogears::SETissueSystem::Unload ( ) const

overridevirtual

Implements biogears::SESystem.

Reimplemented in biogears::Tissue.

void biogears::SETissueSystem::Unload ( CDM::TissueSystemData & data ) const

protected

Member Data Documentation

SEScalarVolumePerTime* biogears::SETissueSystem::m_CarbonDioxideProductionRate

protected

SEScalar0To1* biogears::SETissueSystem::m_DehydrationFraction

protected

SEScalarVolume* biogears::SETissueSystem::m_ExtracellularFluidVolume

protected

SEScalarVolume* biogears::SETissueSystem::m_ExtravascularFluidVolume

protected

SEScalarMassPerVolume* biogears::SETissueSystem::m_FatGlucagonSetPoint

protected

SEScalarAmountPerVolume* biogears::SETissueSystem::m_FatInsulinSetPoint

protected

SEScalar* biogears::SETissueSystem::m_IntracellularFluidPH

protected

SEScalarVolume* biogears::SETissueSystem::m_IntracellularFluidVolume

protected

SEScalarMassPerVolume* biogears::SETissueSystem::m_LiverGlucagonSetPoint

protected

SEScalarMass* biogears::SETissueSystem::m_LiverGlycogen

protected

SEScalarAmountPerVolume* biogears::SETissueSystem::m_LiverInsulinSetPoint

protected

SEScalarMassPerVolume* biogears::SETissueSystem::m_MuscleGlucagonSetPoint

protected

SEScalarMass* biogears::SETissueSystem::m_MuscleGlycogen

protected

SEScalarAmountPerVolume* biogears::SETissueSystem::m_MuscleInsulinSetPoint

protected

SEScalarVolumePerTime* biogears::SETissueSystem::m_OxygenConsumptionRate

protected

SEScalar* biogears::SETissueSystem::m_RespiratoryExchangeRatio

protected

SEScalarMass* biogears::SETissueSystem::m_StoredFat

protected

SEScalarMass* biogears::SETissueSystem::m_StoredProtein

protected

SEScalarVolume* biogears::SETissueSystem::m_TotalBodyFluidVolume

protected

Public Member Functions

Static Public Member Functions

Protected Member Functions

Protected Attributes

Additional Inherited Members

Constructor & Destructor Documentation

Member Function Documentation

Member Data Documentation