#include <SECompartmentTransportGraph.h>

Inheritance diagram for biogears::SECompartmentTransportGraph< COMPARTMENT_TRANSPORT_GRAPH_TEMPLATE >:

Public Member Functions
	SECompartmentTransportGraph (const char name, Logger logger)

	SECompartmentTransportGraph (const std::string &name, Logger *logger)

virtual	~SECompartmentTransportGraph ()

virtual void	Clear () override

virtual std::string	GetName () const override

virtual const char *	GetName_cStr () const override

virtual void	StateChange ()

Public Member Functions inherited from biogears::SECompartmentGraph< COMPARTMENT_GRAPH_TYPES >
virtual	~SECompartmentGraph ()

virtual void	AddCompartment (CompartmentType &cmpt)

virtual CompartmentType *	GetCompartment (const char *name)

virtual CompartmentType *	GetCompartment (const std::string &name)

virtual const CompartmentType *	GetCompartment (const char *name) const

virtual const CompartmentType *	GetCompartment (const std::string &name) const

virtual const std::vector< CompartmentType * > &	GetCompartments () const

virtual void	RemoveCompartment (const CompartmentType &cmpt)

virtual void	RemoveCompartment (const char *name)

virtual void	RemoveCompartment (const std::string &name)

virtual CompartmentLinkType *	GetLink (const char *name)

virtual CompartmentLinkType *	GetLink (const std::string &name)

virtual const CompartmentLinkType *	GetLink (const char *name) const

virtual const CompartmentLinkType *	GetLink (const std::string &name) const

virtual void	AddLink (CompartmentLinkType &link)

virtual const std::vector< CompartmentLinkType * > &	GetLinks () const

virtual void	RemoveLink (const CompartmentLinkType &link)

virtual void	RemoveLink (const char *name)

virtual void	RemoveLink (const std::string &name)

Public Member Functions inherited from biogears::Loggable
	Loggable ()

	Loggable (Logger *log)

virtual	~Loggable ()

virtual Logger *	GetLogger () const

Protected Member Functions
virtual void	BalanceByIntensive () override=0

virtual size_t	GetVertexIndex (const GraphVertexType &v) const override

virtual const std::vector< GraphVertexType * > &	GetVerticies () const override

virtual const std::vector< GraphEdgeType * > *	GetSourceEdges (const GraphVertexType &v) const override

virtual const std::vector< GraphEdgeType * > *	GetTargetEdges (const GraphVertexType &v) const override

Protected Member Functions inherited from biogears::SECompartmentGraph< COMPARTMENT_GRAPH_TYPES >
	SECompartmentGraph (const std::string &name, Logger *logger)

	SECompartmentGraph (const char name, Logger logger)

Protected Member Functions inherited from biogears::Loggable
virtual void	Debug (const char msg, const char origin="") const

virtual void	Debug (const std::string &msg, const std::string &origin=empty) const

virtual void	Debug (std::ostream &msg, const std::string &origin=empty) const

virtual void	Info (const char msg, const char origin="") const

virtual void	Info (const std::string &msg, const std::string &origin=empty) const

virtual void	Info (std::ostream &msg, const std::string &origin=empty) const

virtual void	Warning (const char msg, const char origin="") const

virtual void	Warning (const std::string &msg, const std::string &origin=empty) const

virtual void	Warning (std::ostream &msg, const std::string &origin=empty) const

virtual void	Error (const char msg, const char origin="") const

virtual void	Error (const std::string msg, const std::string origin=empty) const

virtual void	Error (std::ostream &msg, const std::string &origin=empty) const

virtual void	Fatal (const char msg, const char origin="") const

virtual void	Fatal (const std::string &msg, const std::string &origin=empty) const

virtual void	Fatal (std::ostream &msg, const std::string &origin=empty) const

Protected Attributes
std::vector< GraphVertexType * >	m_Verticies

std::map< const GraphVertexType *, size_t >	m_VertexIndicies

std::map< const GraphVertexType , std::vector< GraphEdgeType > * >	m_SourceEdgeMap

std::map< const GraphVertexType , std::vector< GraphEdgeType > * >	m_TargetEdgeMap

Protected Attributes inherited from biogears::SECompartmentGraph< COMPARTMENT_GRAPH_TYPES >
std::string	m_Name

std::vector< CompartmentType * >	m_Compartments

std::vector< CompartmentLinkType * >	m_CompartmentLinks

Protected Attributes inherited from biogears::Loggable
Logger *	m_Logger

Additional Inherited Members
Static Public Attributes inherited from biogears::Loggable
static const std::string	empty

static const char *	empty_cStr