#include <BioGearsEngineTest.h>

Inheritance diagram for biogears::BioGearsEngineTest:

Public Types
enum	MealType { CarbsOnly, ProteinOnly, FatOnly, Balanced, None }

Public Member Functions
	BioGearsEngineTest ()

	BioGearsEngineTest (Logger *logger)

virtual	~BioGearsEngineTest ()

bool	RunTest (const std::string &testName, const std::string &sOutputDirectory)

void	FillFunctionMap ()

void	CardiovascularCircuitAndTransportTest (const std::string &sTestDirectory)

void	CardiovascularAndRenalCircuitAndTransportTest (const std::string &sTestDirectory)

void	CardiovascularAndTissueCircuitAndTransportTest (const std::string &sTestDirectory)

void	CardiovascularTissueAndRenalCircuitAndTransportTest (const std::string &sTestDirectory)

void	CardiovascularBloodGasesTest (const std::string &sTestDirectory)

void	TuneCardiovascularCircuitTest (const std::string &sTestDirectory)

void	CardiovascularCircuitScaleTests (const std::string &sTestDirectory)

void	RenalCircuitAndTransportTest (const std::string &sTestDirectory)

void	RenalTGFFeedbackTest (const std::string &sTestDirectory)

void	RenalTGFandUPRFeedbackTest (const std::string &sTestDirectory)

void	RenalSecretionTest (const std::string &sTestDirectory)

void	RenalUrinateTest (const std::string &sTestDirectory)

void	RespiratoryCircuitAndTransportTest (const std::string &sTestDirectory)

void	RespiratoryDriverTest (const std::string &sTestDirectory)

void	AnesthesiaMachineCircuitAndTransportTest (const std::string &sTestDirectory)

void	RespiratoryWithAnesthesiaMachineCircuitAndTransportTest (const std::string &sTestDirectory)

void	RespiratoryWithInhalerCircuitAndTransportTest (const std::string &sTestDirectory)

void	RespiratoryWithMechanicalVentilatorCircuitAndTransportTest (const std::string &sTestDirectory)

void	CustomNutrientKineticsTest (const std::string &sOutputDirectory)

void	ProteinGluconeogenesisTest (const std::string &sOutputDirectory)

void	StarvingKetogenesisTest (const std::string &sOutputDirectory)

void	AnaerobicExerciseTest (const std::string &sOutputDirectory)

void	HormoneStabilityTest (const std::string &sOutputDirectory)

void	StorageTest (const std::string &sOutputDirectory)

void	FullStoresFastingTest (const std::string &sOutputDirectory)

void	LipogenesisTest (const std::string &sOutputDirectory)

void	DigestionProtein (const std::string &sOutputDirectory)

void	DigestionFat (const std::string &sOutputDirectory)

void	DigestionMixed (const std::string &sOutputDirectory)

void	DigestionCarbs (const std::string &sOutputDirectory)

void	AbsorptionCarbs (const std::string &sOutputDirectory)

void	AbsorptionProtein (const std::string &sOutputDirectory)

void	AbsorptionFat (const std::string &sOutputDirectory)

void	InternalTemperatureVariableBMRCircuitTest (const std::string &sTestDirectory)

void	InternalTemperatureVariableSkinCircuitTest (const std::string &sTestDirectory)

void	InternalTemperatureVariableCoreCircuitTest (const std::string &sTestDirectory)

void	EnvironmentVariableTemperatureCircuitTest (const std::string &sTestDirectory)

void	CombinedInternalAndEnvironmentVariableBMRandTemperatureCircuitTest (const std::string &sTestDirectory)

void	CombinedInternalAndEnvironmentSkinTempDropCircuitTest (const std::string &sTestDirectory)

void	EnvironmentISO7730ComparisonTest (const std::string &sTestDirectory)

void	DiffusionClearanceExcretionTests (const std::string &rptDirectory)

void	AlveolarCarbonDioxideDiffusionTest (const std::string &rptDirectory)

void	AlveolarOxygenDiffusionTest (const std::string &rptDirectory)

void	EigenDiffusionTest (const std::string &rptDirectory)

void	FacilitatedDiffusionTest (const std::string &rptDirectory)

void	TissueCombinedTransportTest (const std::string &rptDirectory)

void	BrainInjuryTest (const std::string &rptDirectory)

void	AcuteInflammationTest (const std::string &rptDirectory)

void	FourCompartmentTestSimple (const std::string &sOutputDirectory)

void	AcidBaseFourCompartmentTest (const std::string &sOutputDirectory)

void	FiveCompartmentTestWithDiffusion (const std::string &sOutputDirectory)

void	FiveCompartmentTestWithActiveDiffusion (const std::string &sOutputDirectory)

void	AcidBaseFourCompartmentTestWithProductionConsumption (const std::string &sOutputDirectory)

void	AcidBaseFiveCompartmentTestWithDiffusion (const std::string &sOutputDirectory)

void	AcidBaseFiveCompartmentTestWithProductionConsumptionAndDiffusion (const std::string &sOutputDirectory)

void	AcidBaseMathTest (const std::string &sOutputDirectory)

void	AcidBaseFeedbackTest (const std::string &sOutputDirectory)

void	AcidBaseLimitsTest (const std::string &sOutputDirectory)

void	AcidBaseExtremeTest (const std::string &rptDirectory)

void	AcidBaseBloodGasTests (const std::string &sOutputDirectory)

void	AerosolTest (const std::string &sOutputDirectory)

void	ConditionCombinations (const std::string &rptDirectory)

void	MultiEngineTest (const std::string &sTestDirectory)

void	SerializationTest (const std::string &sTestDirectory)

void	SolverSpeedTest (const std::string &sTestDirectory)

Protected Types
enum	CardiovascularDriver { Sinusoid = 0, Heart }

enum	RenalFeedback { TGF, TGFandUPR }

enum	RenalSystems { Secretion, Urinating }

enum	RespiratoryConfiguration { RespiratorySolo, AnesthesiaMachineSolo, RespiratoryWithAnesthesiaMachine, RespiratoryWithInhaler, RespiratoryWithMechanicalVentilator }

enum	bloodType { ARTERIAL, VENOUS, CAPILLARY, RESPIRATORY_ACIDOSIS, METABOLIC_ALKALOSIS, METABOLIC_ACIDOSIS, RESPIRATORY_ALKALOSIS, CUSTOM }

typedef void(BioGearsEngineTest::*	testFunction) (const std::string &)

typedef std::map< std::string, testFunction >	testMap

Protected Member Functions
void	SinusoidHeartDriver (double time_s, double heartRate_s, double &lHeartElastance, double &rHeartElastance)

void	CardiovascularCircuitAndTransportTest (CardiovascularDriver driverType, double complianceScale, double resistanceScale, double volumeScale, double heartRate_bpm, double sysRes, double sysComp, double aortaRes, double aortaComp, double rightHeartRes, double venaCavaComp, bool connectTissue, bool connectRenal, bool balanceBloodgases, const std::string &sTestDirectory, const std::string &sTestName, bool breakOutResults)

void	TuneCardiovascularCircuitTest (SETestSuite &testSuite, const std::string &sTestDirectory, const std::string &sTestName, SEPatient &patient)

void	RenalFeedbackTest (RenalFeedback feedback, const std::string &sTestDirectory, const std::string &sTestName)

void	RenalSystemTest (RenalSystems systemtest, const std::string &sTestDirectory, const std::string &sTestName)
	checks secretion function and osmolarity/lality calculations as a function of substance quantities More...

void	RespiratoryCircuitAndTransportTest (RespiratoryConfiguration config, const std::string &sTestDirectory)

void	AnesthesiaMachineCircuitAndTransportTest (RespiratoryConfiguration config, const std::string &sTestDirectory)
	Runs the test for the circuit math in the anesthesia machine. More...

void	NutrientKineticsTest (bool usingAbsorption, bool usingDynamicHormones, bool usingGlycogen, bool usingProteinStorage, bool usingFatStorage, bool fullStores, bool useDiffusion, bool useConsumption, bool usingLipogenesis, bool usingGluconeogenesis, bool isAnaerobic, double exerciseWork_W, const std::string &sOutputDirectory, double testDuration_hr, MealType mealType=None, std::string testName="Custom")

void	ProduceAndConsume (double baseEnergyRequested_kcal, double exerciseEnergyRequested_kcal, bool isAnaerobic, BioGears &bg, double deltaT_s, double brainFlowFraction, double &muscleGlycogen_g, double &CO2Produced_mol, double &O2Consumed_mol, double &brainEnergyDeficit_kcal, double &muscleEnergyDeficit_kcal, double &lactateFromGlucose_g, DataTrack &trk)

void	DigestionTest (const std::string &sOutputDirectory, MealType=None)

void	AbsorptionTest (const std::string &sOutputDirectory, MealType=None)

void	DistributeMass (SETestSuite &testSuite)

void	PerfusionLimitedDiffusionTest (SETestSuite &testSuite)

void	GenericClearanceTest (SETestSuite &testSuite)

void	GenericExcretionTest (SETestSuite &testSuite)

double	Up1 (double y, double x, double n)

double	Up2 (double y, double x, double n)

double	Down (double y, double x, double n)

double	AlbuminTransport (SELiquidCompartment &from, SELiquidCompartment &to, SEFluidCircuitPath &flowPath, SESubstance &alb, double dt_min, double tissueIntegrity)

void	UpdateOncoticPressure (SEScalarMassPerVolume &albVas, SEScalarMassPerVolume &albExtra, SEFluidCircuitPath &plasma, SEFluidCircuitPath &inter)

void	FourCompartmentTest (bool usingAcidBase, bool usingProductionConsumption, bool usingDiffusion, bool activeDiffusion, const std::string &sOutputDirectory)

void	AcidBaseBloodGasTest (BioGears &bg, bloodType compartment, SETestSuite &testSuite)

void	SizeIndependentDepositionEfficencyCoefficientsTest (SETestSuite &suite, SESubstance &substance, double expectedMouthCoeff, double expectedCarinaCoeff, double expectedDeadSpaceCoeff, double expectedAlveoliCoeff)

void	DepositionFractionTest (SETestSuite &suite, SESubstance &substance, double expectedMouthDepFrac, double expectedCarinaDepFrac, double expectedDeadSpaceDepFrac, double expectedAlveoliDepFrac)

void	InhalerState (PhysiologyEngine *bg, HowToTracker &tracker)

void	InjectSuccsState (PhysiologyEngine *bg, HowToTracker &tracker, const SESubstance &succs)

Protected Attributes
bool	myLogger

testMap	bgeMap

std::stringstream	m_ss

double	m_MeanAortaPressure

double	m_MeanCVPressure

double	m_Systolic

double	m_Diastolic

double	m_Pulse

double	m_CardiacOutput

bool	usingAcidBase

bool	usingProductionConsumption

bool	usingDiffusion

bool	activeDiffusion

Additional Inherited Members
Private Member Functions inherited from biogears::Loggable
	Loggable ()

	Loggable (Logger *log)

virtual	~Loggable ()

virtual Logger *	GetLogger () const

virtual void	Debug (const char msg, const char origin="") const

virtual void	Debug (const std::string &msg, const std::string &origin=empty) const

virtual void	Debug (std::ostream &msg, const std::string &origin=empty) const

virtual void	Info (const char msg, const char origin="") const

virtual void	Info (const std::string &msg, const std::string &origin=empty) const

virtual void	Info (std::ostream &msg, const std::string &origin=empty) const

virtual void	Warning (const char msg, const char origin="") const

virtual void	Warning (const std::string &msg, const std::string &origin=empty) const

virtual void	Warning (std::ostream &msg, const std::string &origin=empty) const

virtual void	Error (const char msg, const char origin="") const

virtual void	Error (const std::string msg, const std::string origin=empty) const

virtual void	Error (std::ostream &msg, const std::string &origin=empty) const

virtual void	Fatal (const char msg, const char origin="") const

virtual void	Fatal (const std::string &msg, const std::string &origin=empty) const

virtual void	Fatal (std::ostream &msg, const std::string &origin=empty) const

Private Attributes inherited from biogears::Loggable
Logger *	m_Logger

Static Private Attributes inherited from biogears::Loggable
static const std::string	empty

static const char *	empty_cStr

Member Typedef Documentation

typedef void(BioGearsEngineTest::* biogears::BioGearsEngineTest::testFunction) (const std::string &)

protected

typedef std::map<std::string, testFunction> biogears::BioGearsEngineTest::testMap

protected

Member Enumeration Documentation

enum biogears::BioGearsEngineTest::bloodType

protected

Enumerator
ARTERIAL
VENOUS
CAPILLARY
RESPIRATORY_ACIDOSIS
METABOLIC_ALKALOSIS
METABOLIC_ACIDOSIS
RESPIRATORY_ALKALOSIS
CUSTOM

enum biogears::BioGearsEngineTest::CardiovascularDriver

protected

Enumerator
Sinusoid
Heart

enum biogears::BioGearsEngineTest::MealType

Enumerator
CarbsOnly
ProteinOnly
FatOnly
Balanced
None

enum biogears::BioGearsEngineTest::RenalFeedback

protected

Enumerator
TGF
TGFandUPR

enum biogears::BioGearsEngineTest::RenalSystems

protected

Enumerator
Secretion
Urinating

enum biogears::BioGearsEngineTest::RespiratoryConfiguration

protected

Enumerator
RespiratorySolo
AnesthesiaMachineSolo
RespiratoryWithAnesthesiaMachine
RespiratoryWithInhaler
RespiratoryWithMechanicalVentilator

Constructor & Destructor Documentation

biogears::BioGearsEngineTest::BioGearsEngineTest ( )

biogears::BioGearsEngineTest::BioGearsEngineTest ( Logger * logger )

biogears::BioGearsEngineTest::~BioGearsEngineTest ( )

virtual

Member Function Documentation

void biogears::BioGearsEngineTest::AbsorptionCarbs ( const std::string & sOutputDirectory )

void biogears::BioGearsEngineTest::AbsorptionFat ( const std::string & sOutputDirectory )

void biogears::BioGearsEngineTest::AbsorptionProtein ( const std::string & sOutputDirectory )

void biogears::BioGearsEngineTest::AbsorptionTest	(	const std::string &	sOutputDirectory,
		MealType	mealType = `None`
	)

protected

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[32]

void biogears::BioGearsEngineTest::AcidBaseBloodGasTest	(	BioGears &	bg,
		bloodType	compartment,
		SETestSuite &	testSuite
	)

protected

void biogears::BioGearsEngineTest::AcidBaseBloodGasTests ( const std::string & sOutputDirectory )

Todo:: Do these tests with Strong Ion Differences once we ensure the Sodium, Potassium, and Chloride concentrations are correct and being handled properly

void biogears::BioGearsEngineTest::AcidBaseExtremeTest ( const std::string & rptDirectory )

void biogears::BioGearsEngineTest::AcidBaseFeedbackTest ( const std::string & sOutputDirectory )

void biogears::BioGearsEngineTest::AcidBaseFiveCompartmentTestWithDiffusion ( const std::string & sOutputDirectory )

void biogears::BioGearsEngineTest::AcidBaseFiveCompartmentTestWithProductionConsumptionAndDiffusion ( const std::string & sOutputDirectory )

void biogears::BioGearsEngineTest::AcidBaseFourCompartmentTest ( const std::string & sOutputDirectory )

void biogears::BioGearsEngineTest::AcidBaseFourCompartmentTestWithProductionConsumption ( const std::string & sOutputDirectory )

void biogears::BioGearsEngineTest::AcidBaseLimitsTest ( const std::string & sOutputDirectory )

void biogears::BioGearsEngineTest::AcidBaseMathTest ( const std::string & sOutputDirectory )

void biogears::BioGearsEngineTest::AcuteInflammationTest ( const std::string & rptDirectory )

void biogears::BioGearsEngineTest::AerosolTest ( const std::string & sOutputDirectory )

double biogears::BioGearsEngineTest::AlbuminTransport	(	SELiquidCompartment &	from,
		SELiquidCompartment &	to,
		SEFluidCircuitPath &	flowPath,
		SESubstance &	alb,
		double	dt_min,
		double	tissueIntegrity
	)

protected

void biogears::BioGearsEngineTest::AlveolarCarbonDioxideDiffusionTest ( const std::string & rptDirectory )

void biogears::BioGearsEngineTest::AlveolarOxygenDiffusionTest ( const std::string & rptDirectory )

void biogears::BioGearsEngineTest::AnaerobicExerciseTest ( const std::string & sOutputDirectory )

void biogears::BioGearsEngineTest::AnesthesiaMachineCircuitAndTransportTest ( const std::string & sTestDirectory )

void biogears::BioGearsEngineTest::AnesthesiaMachineCircuitAndTransportTest	(	RespiratoryConfiguration	config,
		const std::string &	sTestDirectory
	)

protected

Runs the test for the circuit math in the anesthesia machine.

Parameters

sTestDirectory Contains the path to the directory where the output file is stored

Tests the anesthesia machine circuit mechanics by reading in a text file that contains the driver and variable values for the circuit elements.The outputs are the resultant flows and pressures on the circuit nodes and paths. These are then stored in a file in sTestDirectory

void biogears::BioGearsEngineTest::BrainInjuryTest ( const std::string & rptDirectory )

void biogears::BioGearsEngineTest::CardiovascularAndRenalCircuitAndTransportTest ( const std::string & sTestDirectory )

void biogears::BioGearsEngineTest::CardiovascularAndTissueCircuitAndTransportTest ( const std::string & sTestDirectory )

void biogears::BioGearsEngineTest::CardiovascularBloodGasesTest ( const std::string & sTestDirectory )

void biogears::BioGearsEngineTest::CardiovascularCircuitAndTransportTest ( const std::string & sTestDirectory )

void biogears::BioGearsEngineTest::CardiovascularCircuitAndTransportTest	(	CardiovascularDriver	driverType,
		double	complianceScale,
		double	resistanceScale,
		double	volumeScale,
		double	heartRate_bpm,
		double	sysRes,
		double	sysComp,
		double	aortaRes,
		double	aortaComp,
		double	rightHeartRes,
		double	venaCavaComp,
		bool	connectTissue,
		bool	connectRenal,
		bool	balanceBloodgases,
		const std::string &	sTestDirectory,
		const std::string &	sTestName,
		bool	breakOutResults
	)

protected

void biogears::BioGearsEngineTest::CardiovascularCircuitScaleTests ( const std::string & sTestDirectory )

void biogears::BioGearsEngineTest::CardiovascularTissueAndRenalCircuitAndTransportTest ( const std::string & sTestDirectory )

void biogears::BioGearsEngineTest::CombinedInternalAndEnvironmentSkinTempDropCircuitTest ( const std::string & sTestDirectory )

void biogears::BioGearsEngineTest::CombinedInternalAndEnvironmentVariableBMRandTemperatureCircuitTest ( const std::string & sTestDirectory )

void biogears::BioGearsEngineTest::ConditionCombinations ( const std::string & rptDirectory )

void biogears::BioGearsEngineTest::CustomNutrientKineticsTest ( const std::string & sOutputDirectory )

void biogears::BioGearsEngineTest::DepositionFractionTest	(	SETestSuite &	suite,
		SESubstance &	substance,
		double	expectedMouthDepFrac,
		double	expectedCarinaDepFrac,
		double	expectedDeadSpaceDepFrac,
		double	expectedAlveoliDepFrac
	)

protected

void biogears::BioGearsEngineTest::DiffusionClearanceExcretionTests ( const std::string & rptDirectory )

void biogears::BioGearsEngineTest::DigestionCarbs ( const std::string & sOutputDirectory )

void biogears::BioGearsEngineTest::DigestionFat ( const std::string & sOutputDirectory )

void biogears::BioGearsEngineTest::DigestionMixed ( const std::string & sOutputDirectory )

void biogears::BioGearsEngineTest::DigestionProtein ( const std::string & sOutputDirectory )

void biogears::BioGearsEngineTest::DigestionTest	(	const std::string &	sOutputDirectory,
		MealType	mealType = `None`
	)

protected

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void biogears::BioGearsEngineTest::DistributeMass ( SETestSuite & testSuite )

protected

double biogears::BioGearsEngineTest::Down	(	double	y,
		double	x,
		double	n
	)

protected

void biogears::BioGearsEngineTest::EigenDiffusionTest ( const std::string & rptDirectory )

void biogears::BioGearsEngineTest::EnvironmentISO7730ComparisonTest ( const std::string & sTestDirectory )

void biogears::BioGearsEngineTest::EnvironmentVariableTemperatureCircuitTest ( const std::string & sTestDirectory )

void biogears::BioGearsEngineTest::FacilitatedDiffusionTest ( const std::string & rptDirectory )

Todo:: Relate capillary coverage to tissue mass.

void biogears::BioGearsEngineTest::FillFunctionMap ( )

void biogears::BioGearsEngineTest::FiveCompartmentTestWithActiveDiffusion ( const std::string & sOutputDirectory )

void biogears::BioGearsEngineTest::FiveCompartmentTestWithDiffusion ( const std::string & sOutputDirectory )

void biogears::BioGearsEngineTest::FourCompartmentTest	(	bool	usingAcidBase,
		bool	usingProductionConsumption,
		bool	usingDiffusion,
		bool	activeDiffusion,
		const std::string &	sOutputDirectory
	)

protected

void biogears::BioGearsEngineTest::FourCompartmentTestSimple ( const std::string & sOutputDirectory )

void biogears::BioGearsEngineTest::FullStoresFastingTest ( const std::string & sOutputDirectory )

void biogears::BioGearsEngineTest::GenericClearanceTest ( SETestSuite & testSuite )

protected

void biogears::BioGearsEngineTest::GenericExcretionTest ( SETestSuite & testSuite )

protected

void biogears::BioGearsEngineTest::HormoneStabilityTest ( const std::string & sOutputDirectory )

void biogears::BioGearsEngineTest::InhalerState	(	PhysiologyEngine *	bg,
		HowToTracker &	tracker
	)

protected

void biogears::BioGearsEngineTest::InjectSuccsState	(	PhysiologyEngine *	bg,
		HowToTracker &	tracker,
		const SESubstance &	succs
	)

protected

void biogears::BioGearsEngineTest::InternalTemperatureVariableBMRCircuitTest ( const std::string & sTestDirectory )

void biogears::BioGearsEngineTest::InternalTemperatureVariableCoreCircuitTest ( const std::string & sTestDirectory )

void biogears::BioGearsEngineTest::InternalTemperatureVariableSkinCircuitTest ( const std::string & sTestDirectory )

void biogears::BioGearsEngineTest::LipogenesisTest ( const std::string & sOutputDirectory )

void biogears::BioGearsEngineTest::MultiEngineTest ( const std::string & sTestDirectory )

void biogears::BioGearsEngineTest::NutrientKineticsTest	(	bool	usingAbsorption,
		bool	usingDynamicHormones,
		bool	usingGlycogen,
		bool	usingProteinStorage,
		bool	usingFatStorage,
		bool	fullStores,
		bool	useDiffusion,
		bool	useConsumption,
		bool	usingLipogenesis,
		bool	usingGluconeogenesis,
		bool	isAnaerobic,
		double	exerciseWork_W,
		const std::string &	sOutputDirectory,
		double	testDuration_hr,
		MealType	mealType = `None`,
		std::string	testName = `"Custom"`
	)

protected

void biogears::BioGearsEngineTest::PerfusionLimitedDiffusionTest ( SETestSuite & testSuite )

protected

void biogears::BioGearsEngineTest::ProduceAndConsume	(	double	baseEnergyRequested_kcal,
		double	exerciseEnergyRequested_kcal,
		bool	isAnaerobic,
		BioGears &	bg,
		double	deltaT_s,
		double	brainFlowFraction,
		double &	muscleGlycogen_g,
		double &	CO2Produced_mol,
		double &	O2Consumed_mol,
		double &	brainEnergyDeficit_kcal,
		double &	muscleEnergyDeficit_kcal,
		double &	lactateFromGlucose_g,
		DataTrack &	trk
	)

protected

void biogears::BioGearsEngineTest::ProteinGluconeogenesisTest ( const std::string & sOutputDirectory )

void biogears::BioGearsEngineTest::RenalCircuitAndTransportTest ( const std::string & sTestDirectory )

void biogears::BioGearsEngineTest::RenalFeedbackTest	(	RenalFeedback	feedback,
		const std::string &	sTestDirectory,
		const std::string &	sTestName
	)

protected

void biogears::BioGearsEngineTest::RenalSecretionTest ( const std::string & sTestDirectory )

void biogears::BioGearsEngineTest::RenalSystemTest	(	RenalSystems	systemtest,
		const std::string &	sTestDirectory,
		const std::string &	sTestName
	)

protected

checks secretion function and osmolarity/lality calculations as a function of substance quantities

increment postassium values above average blood concentration levels and let run for a number of seconds. After stabilization time has run compute osmolarity/lality output potassium blood concentration levels and osmolarity/lality, check against data.

void biogears::BioGearsEngineTest::RenalTGFandUPRFeedbackTest ( const std::string & sTestDirectory )

void biogears::BioGearsEngineTest::RenalTGFFeedbackTest ( const std::string & sTestDirectory )

void biogears::BioGearsEngineTest::RenalUrinateTest ( const std::string & sTestDirectory )

void biogears::BioGearsEngineTest::RespiratoryCircuitAndTransportTest ( const std::string & sTestDirectory )

void biogears::BioGearsEngineTest::RespiratoryCircuitAndTransportTest	(	RespiratoryConfiguration	config,
		const std::string &	sTestDirectory
	)

protected

void biogears::BioGearsEngineTest::RespiratoryDriverTest ( const std::string & sTestDirectory )

void biogears::BioGearsEngineTest::RespiratoryWithAnesthesiaMachineCircuitAndTransportTest ( const std::string & sTestDirectory )

void biogears::BioGearsEngineTest::RespiratoryWithInhalerCircuitAndTransportTest ( const std::string & sTestDirectory )

void biogears::BioGearsEngineTest::RespiratoryWithMechanicalVentilatorCircuitAndTransportTest ( const std::string & sTestDirectory )

bool biogears::BioGearsEngineTest::RunTest	(	const std::string &	testName,
		const std::string &	sOutputDirectory
	)

void biogears::BioGearsEngineTest::SerializationTest ( const std::string & sTestDirectory )

void biogears::BioGearsEngineTest::SinusoidHeartDriver	(	double	time_s,
		double	heartRate_s,
		double &	lHeartElastance,
		double &	rHeartElastance
	)

protected

void biogears::BioGearsEngineTest::SizeIndependentDepositionEfficencyCoefficientsTest	(	SETestSuite &	suite,
		SESubstance &	substance,
		double	expectedMouthCoeff,
		double	expectedCarinaCoeff,
		double	expectedDeadSpaceCoeff,
		double	expectedAlveoliCoeff
	)

protected

void biogears::BioGearsEngineTest::SolverSpeedTest ( const std::string & sTestDirectory )

void biogears::BioGearsEngineTest::StarvingKetogenesisTest ( const std::string & sOutputDirectory )

void biogears::BioGearsEngineTest::StorageTest ( const std::string & sOutputDirectory )

void biogears::BioGearsEngineTest::TissueCombinedTransportTest ( const std::string & rptDirectory )

void biogears::BioGearsEngineTest::TuneCardiovascularCircuitTest ( const std::string & sTestDirectory )

void biogears::BioGearsEngineTest::TuneCardiovascularCircuitTest	(	SETestSuite &	testSuite,
		const std::string &	sTestDirectory,
		const std::string &	sTestName,
		SEPatient &	patient
	)

protected

double biogears::BioGearsEngineTest::Up1	(	double	y,
		double	x,
		double	n
	)

protected

double biogears::BioGearsEngineTest::Up2	(	double	y,
		double	x,
		double	n
	)

protected

void biogears::BioGearsEngineTest::UpdateOncoticPressure	(	SEScalarMassPerVolume &	albVas,
		SEScalarMassPerVolume &	albExtra,
		SEFluidCircuitPath &	plasma,
		SEFluidCircuitPath &	inter
	)

protected

Member Data Documentation

bool biogears::BioGearsEngineTest::activeDiffusion

protected

testMap biogears::BioGearsEngineTest::bgeMap

protected

double biogears::BioGearsEngineTest::m_CardiacOutput

protected

double biogears::BioGearsEngineTest::m_Diastolic

protected

double biogears::BioGearsEngineTest::m_MeanAortaPressure

protected

double biogears::BioGearsEngineTest::m_MeanCVPressure

protected

double biogears::BioGearsEngineTest::m_Pulse

protected

std::stringstream biogears::BioGearsEngineTest::m_ss

protected

double biogears::BioGearsEngineTest::m_Systolic

protected

bool biogears::BioGearsEngineTest::myLogger

protected

bool biogears::BioGearsEngineTest::usingAcidBase

protected

bool biogears::BioGearsEngineTest::usingDiffusion

protected

bool biogears::BioGearsEngineTest::usingProductionConsumption

protected

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