#include <SETissueCompartment.h>

Inheritance diagram for biogears::SETissueCompartment:

Public Member Functions
virtual	~SETissueCompartment ()

virtual void	Clear () override

virtual bool	Load (const CDM::TissueCompartmentData &in, SESubstanceManager &subMgr, SECircuitManager *circuits=nullptr)

virtual CDM::TissueCompartmentData *	Unload () override

virtual const SEScalar *	GetScalar (const char *name) override

virtual const SEScalar *	GetScalar (const std::string &name) override

virtual bool	HasChildren () const override

virtual const std::vector< SETissueCompartment * > &	GetChildren ()

virtual const std::vector< SETissueCompartment * > &	GetLeaves ()

virtual void	StateChange () override

virtual bool	HasAcidicPhospohlipidConcentration () const

virtual SEScalarMassPerMass &	GetAcidicPhospohlipidConcentration ()

virtual double	GetAcidicPhospohlipidConcentration (const MassPerMassUnit &unit) const

virtual bool	HasMatrixVolume () const

virtual SEScalarVolume &	GetMatrixVolume ()

virtual double	GetMatrixVolume (const VolumeUnit &unit) const

virtual bool	HasMembranePotential () const

virtual SEScalarElectricPotential &	GetMembranePotential ()

virtual double	GetMembranePotential (const ElectricPotentialUnit &unit) const

virtual bool	HasNeutralLipidsVolumeFraction () const

virtual SEScalarFraction &	GetNeutralLipidsVolumeFraction ()

virtual double	GetNeutralLipidsVolumeFraction () const

virtual bool	HasNeutralPhospholipidsVolumeFraction () const

virtual SEScalarFraction &	GetNeutralPhospholipidsVolumeFraction ()

virtual double	GetNeutralPhospholipidsVolumeFraction () const

virtual bool	HasReflectionCoefficient () const

virtual SEScalar0To1 &	GetReflectionCoefficient ()

virtual double	GetReflectionCoefficient () const

virtual bool	HasTissueToPlasmaAlbuminRatio () const

virtual SEScalar &	GetTissueToPlasmaAlbuminRatio ()

virtual double	GetTissueToPlasmaAlbuminRatio () const

virtual bool	HasTissueToPlasmaAlphaAcidGlycoproteinRatio () const

virtual SEScalar &	GetTissueToPlasmaAlphaAcidGlycoproteinRatio ()

virtual double	GetTissueToPlasmaAlphaAcidGlycoproteinRatio () const

virtual bool	HasTissueToPlasmaLipoproteinRatio () const

virtual SEScalar &	GetTissueToPlasmaLipoproteinRatio ()

virtual double	GetTissueToPlasmaLipoproteinRatio () const

virtual bool	HasTotalMass () const

virtual SEScalarMass &	GetTotalMass ()

virtual double	GetTotalMass (const MassUnit &unit) const

Public Member Functions inherited from biogears::SECompartment
virtual	~SECompartment () override

virtual bool	Load (const CDM::CompartmentData &in, SECircuitManager *circuits=nullptr)

virtual std::string	GetName () const

virtual const char *	GetName_cStr () const

Public Member Functions inherited from biogears::Loggable
	Loggable ()

	Loggable (Logger *log)

virtual	~Loggable ()

virtual Logger *	GetLogger () const

Protected Member Functions
	SETissueCompartment (const char name, Logger logger)

	SETissueCompartment (const std::string &name, Logger *logger)

virtual void	Unload (CDM::TissueCompartmentData &data)

Protected Member Functions inherited from biogears::SECompartment
	SECompartment (const char name, Logger logger)

	SECompartment (const std::string &name, Logger *logger)

virtual void	Unload (CDM::CompartmentData &data)

Protected Member Functions inherited from biogears::Loggable
virtual void	Debug (const char msg, const char origin="") const

virtual void	Debug (const std::string &msg, const std::string &origin=empty) const

virtual void	Debug (std::ostream &msg, const std::string &origin=empty) const

virtual void	Info (const char msg, const char origin="") const

virtual void	Info (const std::string &msg, const std::string &origin=empty) const

virtual void	Info (std::ostream &msg, const std::string &origin=empty) const

virtual void	Warning (const char msg, const char origin="") const

virtual void	Warning (const std::string &msg, const std::string &origin=empty) const

virtual void	Warning (std::ostream &msg, const std::string &origin=empty) const

virtual void	Error (const char msg, const char origin="") const

virtual void	Error (const std::string msg, const std::string origin=empty) const

virtual void	Error (std::ostream &msg, const std::string &origin=empty) const

virtual void	Fatal (const char msg, const char origin="") const

virtual void	Fatal (const std::string &msg, const std::string &origin=empty) const

virtual void	Fatal (std::ostream &msg, const std::string &origin=empty) const

Protected Attributes
SEScalarMassPerMass *	m_AcidicPhospohlipidConcentration

SEScalarVolume *	m_MatrixVolume

SEScalarElectricPotential *	m_MembranePotential

SEScalarFraction *	m_NeutralLipidsVolumeFraction

SEScalarFraction *	m_NeutralPhospholipidsVolumeFraction

SEScalar0To1 *	m_ReflectionCoefficient

SEScalar *	m_TissueToPlasmaAlbuminRatio

SEScalar *	m_TissueToPlasmaAlphaAcidGlycoproteinRatio

SEScalar *	m_TissueToPlasmaLipoproteinRatio

SEScalarMass *	m_TotalMass

std::vector< SETissueCompartment * >	m_Children

std::vector< SETissueCompartment * >	m_Leaves

Protected Attributes inherited from biogears::SECompartment
std::string	m_Name

Protected Attributes inherited from biogears::Loggable
Logger *	m_Logger

Friends
class	SECompartmentManager

Additional Inherited Members
Static Public Member Functions inherited from biogears::SECompartment
template<typename CompartmentType >
static void	FindLeaves (CompartmentType &cmpt, std::vector< CompartmentType * > &leaves)

Static Public Attributes inherited from biogears::Loggable
static const std::string	empty

static const char *	empty_cStr

Constructor & Destructor Documentation

biogears::SETissueCompartment::SETissueCompartment	(	const char *	name,
		Logger *	logger
	)

protected

biogears::SETissueCompartment::SETissueCompartment	(	const std::string &	name,
		Logger *	logger
	)

protected

biogears::SETissueCompartment::~SETissueCompartment ( )

virtual

Member Function Documentation

void biogears::SETissueCompartment::Clear ( )

overridevirtual

Reimplemented from biogears::SECompartment.

SEScalarMassPerMass & biogears::SETissueCompartment::GetAcidicPhospohlipidConcentration ( )

virtual

double biogears::SETissueCompartment::GetAcidicPhospohlipidConcentration ( const MassPerMassUnit & unit ) const

virtual

virtual const std::vector<SETissueCompartment*>& biogears::SETissueCompartment::GetChildren ( )

inlinevirtual

virtual const std::vector<SETissueCompartment*>& biogears::SETissueCompartment::GetLeaves ( )

inlinevirtual

SEScalarVolume & biogears::SETissueCompartment::GetMatrixVolume ( )

virtual

double biogears::SETissueCompartment::GetMatrixVolume ( const VolumeUnit & unit ) const

virtual

SEScalarElectricPotential & biogears::SETissueCompartment::GetMembranePotential ( )

virtual

double biogears::SETissueCompartment::GetMembranePotential ( const ElectricPotentialUnit & unit ) const

virtual

SEScalarFraction & biogears::SETissueCompartment::GetNeutralLipidsVolumeFraction ( )

virtual

double biogears::SETissueCompartment::GetNeutralLipidsVolumeFraction ( ) const

virtual

SEScalarFraction & biogears::SETissueCompartment::GetNeutralPhospholipidsVolumeFraction ( )

virtual

double biogears::SETissueCompartment::GetNeutralPhospholipidsVolumeFraction ( ) const

virtual

SEScalar0To1 & biogears::SETissueCompartment::GetReflectionCoefficient ( )

virtual

double biogears::SETissueCompartment::GetReflectionCoefficient ( ) const

virtual

const SEScalar * biogears::SETissueCompartment::GetScalar ( const char * name )

overridevirtual

Implements biogears::SECompartment.

const SEScalar * biogears::SETissueCompartment::GetScalar ( const std::string & name )

overridevirtual

Implements biogears::SECompartment.

SEScalar & biogears::SETissueCompartment::GetTissueToPlasmaAlbuminRatio ( )

virtual

double biogears::SETissueCompartment::GetTissueToPlasmaAlbuminRatio ( ) const

virtual

SEScalar & biogears::SETissueCompartment::GetTissueToPlasmaAlphaAcidGlycoproteinRatio ( )

virtual

double biogears::SETissueCompartment::GetTissueToPlasmaAlphaAcidGlycoproteinRatio ( ) const

virtual

SEScalar & biogears::SETissueCompartment::GetTissueToPlasmaLipoproteinRatio ( )

virtual

double biogears::SETissueCompartment::GetTissueToPlasmaLipoproteinRatio ( ) const

virtual

SEScalarMass & biogears::SETissueCompartment::GetTotalMass ( )

virtual

double biogears::SETissueCompartment::GetTotalMass ( const MassUnit & unit ) const

virtual

bool biogears::SETissueCompartment::HasAcidicPhospohlipidConcentration ( ) const

virtual

virtual bool biogears::SETissueCompartment::HasChildren ( ) const

inlineoverridevirtual

Implements biogears::SECompartment.

bool biogears::SETissueCompartment::HasMatrixVolume ( ) const

virtual

bool biogears::SETissueCompartment::HasMembranePotential ( ) const

virtual

bool biogears::SETissueCompartment::HasNeutralLipidsVolumeFraction ( ) const

virtual

bool biogears::SETissueCompartment::HasNeutralPhospholipidsVolumeFraction ( ) const

virtual

bool biogears::SETissueCompartment::HasReflectionCoefficient ( ) const

virtual

bool biogears::SETissueCompartment::HasTissueToPlasmaAlbuminRatio ( ) const

virtual

bool biogears::SETissueCompartment::HasTissueToPlasmaAlphaAcidGlycoproteinRatio ( ) const

virtual

bool biogears::SETissueCompartment::HasTissueToPlasmaLipoproteinRatio ( ) const

virtual

bool biogears::SETissueCompartment::HasTotalMass ( ) const

virtual

bool biogears::SETissueCompartment::Load	(	const CDM::TissueCompartmentData &	in,
		SESubstanceManager &	subMgr,
		SECircuitManager *	circuits = `nullptr`
	)

virtual

void biogears::SETissueCompartment::StateChange ( )

overridevirtual

Implements biogears::SECompartment.

CDM::TissueCompartmentData * biogears::SETissueCompartment::Unload ( )

overridevirtual

Implements biogears::SECompartment.

void biogears::SETissueCompartment::Unload ( CDM::TissueCompartmentData & data )

protectedvirtual

Friends And Related Function Documentation

friend class SECompartmentManager

friend

Member Data Documentation

SEScalarMassPerMass* biogears::SETissueCompartment::m_AcidicPhospohlipidConcentration

protected

std::vector<SETissueCompartment*> biogears::SETissueCompartment::m_Children

protected

std::vector<SETissueCompartment*> biogears::SETissueCompartment::m_Leaves

protected

SEScalarVolume* biogears::SETissueCompartment::m_MatrixVolume

protected

SEScalarElectricPotential* biogears::SETissueCompartment::m_MembranePotential

protected

SEScalarFraction* biogears::SETissueCompartment::m_NeutralLipidsVolumeFraction

protected

SEScalarFraction* biogears::SETissueCompartment::m_NeutralPhospholipidsVolumeFraction

protected

SEScalar0To1* biogears::SETissueCompartment::m_ReflectionCoefficient

protected

SEScalar* biogears::SETissueCompartment::m_TissueToPlasmaAlbuminRatio

protected

SEScalar* biogears::SETissueCompartment::m_TissueToPlasmaAlphaAcidGlycoproteinRatio

protected

SEScalar* biogears::SETissueCompartment::m_TissueToPlasmaLipoproteinRatio

protected

SEScalarMass* biogears::SETissueCompartment::m_TotalMass

protected

Public Member Functions

Protected Member Functions

Protected Attributes

Friends

Additional Inherited Members

Constructor & Destructor Documentation

Member Function Documentation

Friends And Related Function Documentation

Member Data Documentation