biogears::SESubstanceClearance Class Reference

#include <SESubstanceClearance.h>

Inheritance diagram for biogears::SESubstanceClearance:

Public Member Functions
	SESubstanceClearance (Logger *logger)
virtual	~SESubstanceClearance ()
virtual void	Clear ()
virtual bool	IsValid () const
virtual const SEScalar *	GetScalar (const char *name)
virtual const SEScalar *	GetScalar (const std::string &name)
virtual bool	Load (const CDM::SubstanceClearanceData &in)
virtual CDM::SubstanceClearanceData *	Unload () const
virtual bool	HasSystemic () const
virtual void	SetSystemic (bool b)
virtual bool	HasCellular () const
virtual void	SetCellular (bool b)
virtual bool	HasCellBirthRate () const
virtual SEScalarFrequency &	GetCellBirthRate ()
virtual double	GetCellBirthRate (const FrequencyUnit &unit) const
virtual bool	HasCellDeathRate () const
virtual SEScalarFrequency &	GetCellDeathRate ()
virtual double	GetCellDeathRate (const FrequencyUnit &unit) const
virtual CDM::enumCharge::value	GetChargeInBlood () const
virtual void	SetChargeInBlood (CDM::enumCharge::value type)
virtual bool	HasChargeInBlood () const
virtual void	InvalidateChargeInBlood ()
virtual bool	HasFractionExcretedInFeces () const
virtual SEScalarFraction &	GetFractionExcretedInFeces ()
virtual double	GetFractionExcretedInFeces () const
virtual bool	HasFractionExcretedInUrine () const
virtual SEScalarFraction &	GetFractionExcretedInUrine ()
virtual double	GetFractionExcretedInUrine () const
virtual bool	HasFractionMetabolizedInGut () const
virtual SEScalarFraction &	GetFractionMetabolizedInGut ()
virtual double	GetFractionMetabolizedInGut () const
virtual bool	HasFractionUnboundInPlasma () const
virtual SEScalarFraction &	GetFractionUnboundInPlasma ()
virtual double	GetFractionUnboundInPlasma () const
virtual bool	HasGlomerularFilterability () const
virtual SEScalar &	GetGlomerularFilterability ()
virtual double	GetGlomerularFilterability () const
virtual bool	HasIntrinsicClearance () const
virtual SEScalarVolumePerTimeMass &	GetIntrinsicClearance ()
virtual double	GetIntrinsicClearance (const VolumePerTimeMassUnit &unit) const
virtual RenalDynamic	GetRenalDynamic () const
virtual void	SetRenalDynamic (RenalDynamic d)
virtual bool	HasRenalDynamic () const
virtual void	InvalidateRenalDynamic ()
virtual bool	HasRenalClearance () const
virtual SEScalarVolumePerTimeMass &	GetRenalClearance ()
virtual double	GetRenalClearance (const VolumePerTimeMassUnit &unit) const
virtual bool	HasRenalReabsorptionRatio () const
virtual SEScalar &	GetRenalReabsorptionRatio ()
virtual double	GetRenalReabsorptionRatio () const
virtual bool	HasRenalTransportMaximum () const
virtual SEScalarMassPerTime &	GetRenalTransportMaximum ()
virtual double	GetRenalTransportMaximum (const MassPerTimeUnit &unit) const
virtual bool	HasRenalFiltrationRate () const
virtual SEScalarMassPerTime &	GetRenalFiltrationRate ()
virtual double	GetRenalFiltrationRate (const MassPerTimeUnit &unit) const
virtual bool	HasRenalReabsorptionRate () const
virtual SEScalarMassPerTime &	GetRenalReabsorptionRate ()
virtual double	GetRenalReabsorptionRate (const MassPerTimeUnit &unit) const
virtual bool	HasRenalExcretionRate () const
virtual SEScalarMassPerTime &	GetRenalExcretionRate ()
virtual double	GetRenalExcretionRate (const MassPerTimeUnit &unit) const
virtual bool	HasSystemicClearance () const
virtual SEScalarVolumePerTimeMass &	GetSystemicClearance ()
virtual double	GetSystemicClearance (const VolumePerTimeMassUnit &unit) const
Public Member Functions inherited from biogears::Loggable
	Loggable ()
	Loggable (Logger *log)
virtual	~Loggable ()
virtual Logger *	GetLogger () const

Protected Member Functions
virtual void	Unload (CDM::SubstanceClearanceData &data) const
Protected Member Functions inherited from biogears::Loggable
virtual void	Debug (const char *msg, const char *origin="") const
virtual void	Debug (const std::string &msg, const std::string &origin=empty) const
virtual void	Debug (std::ostream &msg, const std::string &origin=empty) const
virtual void	Info (const char *msg, const char *origin="") const
virtual void	Info (const std::string &msg, const std::string &origin=empty) const
virtual void	Info (std::ostream &msg, const std::string &origin=empty) const
virtual void	Warning (const char *msg, const char *origin="") const
virtual void	Warning (const std::string &msg, const std::string &origin=empty) const
virtual void	Warning (std::ostream &msg, const std::string &origin=empty) const
virtual void	Error (const char *msg, const char *origin="") const
virtual void	Error (const std::string msg, const std::string origin=empty) const
virtual void	Error (std::ostream &msg, const std::string &origin=empty) const
virtual void	Fatal (const char *msg, const char *origin="") const
virtual void	Fatal (const std::string &msg, const std::string &origin=empty) const
virtual void	Fatal (std::ostream &msg, const std::string &origin=empty) const

Protected Attributes
bool	m_hasSystemic
bool	m_hasCellular
SEScalarFrequency *	m_CellBirthRate
SEScalarFrequency *	m_CellDeathRate
CDM::enumCharge::value	m_ChargeInBlood
SEScalarFraction *	m_FractionExcretedInFeces
SEScalarFraction *	m_FractionExcretedInUrine
SEScalarFraction *	m_FractionMetabolizedInGut
SEScalarFraction *	m_FractionUnboundInPlasma
SEScalarVolumePerTimeMass *	m_IntrinsicClearance
RenalDynamic	m_RenalDynamic
SEScalarVolumePerTimeMass *	m_RenalClearance
SEScalar *	m_RenalReabsorptionRatio
SEScalarMassPerTime *	m_RenalTransportMaximum
SEScalarMassPerTime *	m_RenalFiltrationRate
SEScalarMassPerTime *	m_RenalReabsorptionRate
SEScalarMassPerTime *	m_RenalExcretionRate
SEScalar *	m_GlomerularFilterability
SEScalarVolumePerTimeMass *	m_SystemicClearance
Protected Attributes inherited from biogears::Loggable
Logger *	m_Logger

Additional Inherited Members
Static Public Attributes inherited from biogears::Loggable
static const std::string	empty
static const char *	empty_cStr

Constructor & Destructor Documentation

biogears::SESubstanceClearance::SESubstanceClearance

(

Logger *

logger

)

biogears::SESubstanceClearance::~SESubstanceClearance ( )

virtual

Member Function Documentation

void biogears::SESubstanceClearance::Clear ( )

virtual

SEScalarFrequency & biogears::SESubstanceClearance::GetCellBirthRate ( )

virtual

double biogears::SESubstanceClearance::GetCellBirthRate ( const FrequencyUnit &  unit ) const

virtual

SEScalarFrequency & biogears::SESubstanceClearance::GetCellDeathRate ( )

virtual

double biogears::SESubstanceClearance::GetCellDeathRate ( const FrequencyUnit &  unit ) const

virtual

CDM::enumCharge::value biogears::SESubstanceClearance::GetChargeInBlood ( ) const

virtual

SEScalarFraction & biogears::SESubstanceClearance::GetFractionExcretedInFeces ( )

virtual

double biogears::SESubstanceClearance::GetFractionExcretedInFeces ( ) const

virtual

SEScalarFraction & biogears::SESubstanceClearance::GetFractionExcretedInUrine ( )

virtual

double biogears::SESubstanceClearance::GetFractionExcretedInUrine ( ) const

virtual

SEScalarFraction & biogears::SESubstanceClearance::GetFractionMetabolizedInGut ( )

virtual

double biogears::SESubstanceClearance::GetFractionMetabolizedInGut ( ) const

virtual

SEScalarFraction & biogears::SESubstanceClearance::GetFractionUnboundInPlasma ( )

virtual

double biogears::SESubstanceClearance::GetFractionUnboundInPlasma ( ) const

virtual

SEScalar & biogears::SESubstanceClearance::GetGlomerularFilterability ( )

virtual

double biogears::SESubstanceClearance::GetGlomerularFilterability ( ) const

virtual

SEScalarVolumePerTimeMass & biogears::SESubstanceClearance::GetIntrinsicClearance ( )

virtual

double biogears::SESubstanceClearance::GetIntrinsicClearance ( const VolumePerTimeMassUnit &  unit ) const

virtual

SEScalarVolumePerTimeMass & biogears::SESubstanceClearance::GetRenalClearance ( )

virtual

double biogears::SESubstanceClearance::GetRenalClearance ( const VolumePerTimeMassUnit &  unit ) const

virtual

RenalDynamic biogears::SESubstanceClearance::GetRenalDynamic ( ) const

virtual

SEScalarMassPerTime & biogears::SESubstanceClearance::GetRenalExcretionRate ( )

virtual

double biogears::SESubstanceClearance::GetRenalExcretionRate ( const MassPerTimeUnit &  unit ) const

virtual

SEScalarMassPerTime & biogears::SESubstanceClearance::GetRenalFiltrationRate ( )

virtual

double biogears::SESubstanceClearance::GetRenalFiltrationRate ( const MassPerTimeUnit &  unit ) const

virtual

SEScalarMassPerTime & biogears::SESubstanceClearance::GetRenalReabsorptionRate ( )

virtual

double biogears::SESubstanceClearance::GetRenalReabsorptionRate ( const MassPerTimeUnit &  unit ) const

virtual

SEScalar & biogears::SESubstanceClearance::GetRenalReabsorptionRatio ( )

virtual

double biogears::SESubstanceClearance::GetRenalReabsorptionRatio ( ) const

virtual

SEScalarMassPerTime & biogears::SESubstanceClearance::GetRenalTransportMaximum ( )

virtual

double biogears::SESubstanceClearance::GetRenalTransportMaximum ( const MassPerTimeUnit &  unit ) const

virtual

const SEScalar * biogears::SESubstanceClearance::GetScalar ( const char *  name )

virtual

const SEScalar * biogears::SESubstanceClearance::GetScalar ( const std::string &  name )

virtual

SEScalarVolumePerTimeMass & biogears::SESubstanceClearance::GetSystemicClearance ( )

virtual

double biogears::SESubstanceClearance::GetSystemicClearance ( const VolumePerTimeMassUnit &  unit ) const

virtual

bool biogears::SESubstanceClearance::HasCellBirthRate ( ) const

virtual

bool biogears::SESubstanceClearance::HasCellDeathRate ( ) const

virtual

virtual bool biogears::SESubstanceClearance::HasCellular ( ) const

inlinevirtual

bool biogears::SESubstanceClearance::HasChargeInBlood ( ) const

virtual

bool biogears::SESubstanceClearance::HasFractionExcretedInFeces ( ) const

virtual

bool biogears::SESubstanceClearance::HasFractionExcretedInUrine ( ) const

virtual

bool biogears::SESubstanceClearance::HasFractionMetabolizedInGut ( ) const

virtual

bool biogears::SESubstanceClearance::HasFractionUnboundInPlasma ( ) const

virtual

bool biogears::SESubstanceClearance::HasGlomerularFilterability ( ) const

virtual

bool biogears::SESubstanceClearance::HasIntrinsicClearance ( ) const

virtual

bool biogears::SESubstanceClearance::HasRenalClearance ( ) const

virtual

bool biogears::SESubstanceClearance::HasRenalDynamic ( ) const

virtual

bool biogears::SESubstanceClearance::HasRenalExcretionRate ( ) const

virtual

bool biogears::SESubstanceClearance::HasRenalFiltrationRate ( ) const

virtual

bool biogears::SESubstanceClearance::HasRenalReabsorptionRate ( ) const

virtual

bool biogears::SESubstanceClearance::HasRenalReabsorptionRatio ( ) const

virtual

bool biogears::SESubstanceClearance::HasRenalTransportMaximum ( ) const

virtual

virtual bool biogears::SESubstanceClearance::HasSystemic ( ) const

inlinevirtual

bool biogears::SESubstanceClearance::HasSystemicClearance ( ) const

virtual

void biogears::SESubstanceClearance::InvalidateChargeInBlood ( )

virtual

void biogears::SESubstanceClearance::InvalidateRenalDynamic ( )

virtual

bool biogears::SESubstanceClearance::IsValid ( ) const

virtual

bool biogears::SESubstanceClearance::Load ( const CDM::SubstanceClearanceData &  in )

virtual

virtual void biogears::SESubstanceClearance::SetCellular ( bool  b )

inlinevirtual

void biogears::SESubstanceClearance::SetChargeInBlood ( CDM::enumCharge::value  type )

virtual

void biogears::SESubstanceClearance::SetRenalDynamic ( RenalDynamic  d )

virtual

virtual void biogears::SESubstanceClearance::SetSystemic ( bool  b )

inlinevirtual

CDM::SubstanceClearanceData * biogears::SESubstanceClearance::Unload ( ) const

virtual

void biogears::SESubstanceClearance::Unload ( CDM::SubstanceClearanceData &  data ) const

protectedvirtual

Member Data Documentation

SEScalarFrequency* biogears::SESubstanceClearance::m_CellBirthRate

protected

SEScalarFrequency* biogears::SESubstanceClearance::m_CellDeathRate

protected

CDM::enumCharge::value biogears::SESubstanceClearance::m_ChargeInBlood

protected

SEScalarFraction* biogears::SESubstanceClearance::m_FractionExcretedInFeces

protected

SEScalarFraction* biogears::SESubstanceClearance::m_FractionExcretedInUrine

protected

SEScalarFraction* biogears::SESubstanceClearance::m_FractionMetabolizedInGut

protected

SEScalarFraction* biogears::SESubstanceClearance::m_FractionUnboundInPlasma

protected

SEScalar* biogears::SESubstanceClearance::m_GlomerularFilterability

protected

bool biogears::SESubstanceClearance::m_hasCellular

protected

bool biogears::SESubstanceClearance::m_hasSystemic

protected

SEScalarVolumePerTimeMass* biogears::SESubstanceClearance::m_IntrinsicClearance

protected

SEScalarVolumePerTimeMass* biogears::SESubstanceClearance::m_RenalClearance

protected

RenalDynamic biogears::SESubstanceClearance::m_RenalDynamic

protected

SEScalarMassPerTime* biogears::SESubstanceClearance::m_RenalExcretionRate

protected

SEScalarMassPerTime* biogears::SESubstanceClearance::m_RenalFiltrationRate

protected

SEScalarMassPerTime* biogears::SESubstanceClearance::m_RenalReabsorptionRate

protected

SEScalar* biogears::SESubstanceClearance::m_RenalReabsorptionRatio

protected

SEScalarMassPerTime* biogears::SESubstanceClearance::m_RenalTransportMaximum

protected

SEScalarVolumePerTimeMass* biogears::SESubstanceClearance::m_SystemicClearance

protected