Public Member Functions | Static Public Member Functions | Protected Member Functions | Protected Attributes | List of all members
biogears::SEInfection Class Reference

#include <SEInfection.h>

Inheritance diagram for biogears::SEInfection:
Inheritance graph
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Public Member Functions

 SEInfection ()
 
virtual ~SEInfection () override
 
const char * classname () const override
 
virtual void Clear () override
 
virtual bool IsValid () const override
 
virtual bool IsActive () const override
 
virtual bool Load (const CDM::InfectionData &in)
 
virtual CDM::InfectionData * Unload () const override
 
virtual const char * GetLocation_cStr () const
 
virtual std::string GetLocation () const
 
virtual bool HasLocation () const
 
virtual void SetLocation (const char *name)
 
virtual void SetLocation (const std::string &name)
 
virtual void InvalidateLocation ()
 
virtual bool HasSeverity () const
 
virtual CDM::enumInfectionSeverity::value GetSeverity () const
 
virtual void SetSeverity (CDM::enumInfectionSeverity::value t)
 
virtual void InvalidateSeverity ()
 
virtual bool HasMinimumInhibitoryConcentration () const
 
virtual SEScalarMassPerVolume & GetMinimumInhibitoryConcentration ()
 
virtual void ToString (std::ostream &str) const override
 
- Public Member Functions inherited from biogears::SEPatientAction
 SEPatientAction ()
 
virtual ~SEPatientAction ()
 
virtual bool Load (const CDM::PatientActionData &in)
 
- Public Member Functions inherited from biogears::SEAction
 SEAction ()
 
virtual ~SEAction ()
 
virtual bool Load (const CDM::ActionData &in)
 
virtual const char * GetComment () const
 
virtual void SetComment (const char *comment)
 
virtual void SetComment (const std::string &comment)
 
virtual bool HasComment () const
 
virtual void InvalidateComment ()
 
virtual const char * ToString () const
 
- Public Member Functions inherited from biogears::Loggable
 Loggable ()
 
 Loggable (Logger *log)
 
virtual ~Loggable ()
 
virtual Logger * GetLogger () const
 

Static Public Member Functions

static constexpr const char * TypeTag ()
 
- Static Public Member Functions inherited from biogears::SEAction
static SEAction * newFromBind (const CDM::ActionData &action, SESubstanceManager &substances)
 

Protected Member Functions

virtual void Unload (CDM::InfectionData &data) const
 
- Protected Member Functions inherited from biogears::SEPatientAction
virtual void Unload (CDM::PatientActionData &data) const
 
- Protected Member Functions inherited from biogears::SEAction
void Unload (CDM::ActionData &data) const
 
- Protected Member Functions inherited from biogears::Loggable
virtual void Debug (const char *msg, const char *origin="") const
 
virtual void Debug (const std::string &msg, const std::string &origin=empty) const
 
virtual void Debug (std::ostream &msg, const std::string &origin=empty) const
 
virtual void Info (const char *msg, const char *origin="") const
 
virtual void Info (const std::string &msg, const std::string &origin=empty) const
 
virtual void Info (std::ostream &msg, const std::string &origin=empty) const
 
virtual void Warning (const char *msg, const char *origin="") const
 
virtual void Warning (const std::string &msg, const std::string &origin=empty) const
 
virtual void Warning (std::ostream &msg, const std::string &origin=empty) const
 
virtual void Error (const char *msg, const char *origin="") const
 
virtual void Error (const std::string msg, const std::string origin=empty) const
 
virtual void Error (std::ostream &msg, const std::string &origin=empty) const
 
virtual void Fatal (const char *msg, const char *origin="") const
 
virtual void Fatal (const std::string &msg, const std::string &origin=empty) const
 
virtual void Fatal (std::ostream &msg, const std::string &origin=empty) const
 

Protected Attributes

std::string m_Location
 
CDM::enumInfectionSeverity::value m_Severity
 
SEScalarMassPerVolume * m_MinimumInhibitoryConcentration
 
- Protected Attributes inherited from biogears::SEAction
std::string m_Comment
 
std::string m_StringRepresnetation
 
- Protected Attributes inherited from biogears::Loggable
Logger * m_Logger
 

Additional Inherited Members

- Static Public Attributes inherited from biogears::Loggable
static const std::string empty
 
static const char * empty_cStr
 

Constructor & Destructor Documentation

biogears::SEInfection::SEInfection ( )
biogears::SEInfection::~SEInfection ( )
overridevirtual

Member Function Documentation

const char* biogears::SEInfection::classname ( ) const
inlineoverridevirtual

Implements biogears::SEAction.

void biogears::SEInfection::Clear ( )
overridevirtual

Reimplemented from biogears::SEPatientAction.

std::string biogears::SEInfection::GetLocation ( ) const
virtual
const char * biogears::SEInfection::GetLocation_cStr ( ) const
virtual
SEScalarMassPerVolume & biogears::SEInfection::GetMinimumInhibitoryConcentration ( )
virtual
CDM::enumInfectionSeverity::value biogears::SEInfection::GetSeverity ( ) const
virtual
bool biogears::SEInfection::HasLocation ( ) const
virtual
bool biogears::SEInfection::HasMinimumInhibitoryConcentration ( ) const
virtual
bool biogears::SEInfection::HasSeverity ( ) const
virtual
void biogears::SEInfection::InvalidateLocation ( )
virtual
void biogears::SEInfection::InvalidateSeverity ( )
virtual
bool biogears::SEInfection::IsActive ( ) const
overridevirtual

Actions can be turned off or on with various data combinations This method will encapsulate that logic in a single function

Reimplemented from biogears::SEAction.

bool biogears::SEInfection::IsValid ( ) const
overridevirtual

Test if the action has all data it needs

Reimplemented from biogears::SEPatientAction.

bool biogears::SEInfection::Load ( const CDM::InfectionData &  in)
virtual
void biogears::SEInfection::SetLocation ( const char *  name)
virtual
void biogears::SEInfection::SetLocation ( const std::string &  name)
virtual
void biogears::SEInfection::SetSeverity ( CDM::enumInfectionSeverity::value  t)
virtual
void biogears::SEInfection::ToString ( std::ostream &  str) const
overridevirtual

Implements biogears::SEPatientAction.

static constexpr const char* biogears::SEInfection::TypeTag ( )
inlinestatic
CDM::InfectionData * biogears::SEInfection::Unload ( ) const
overridevirtual

Implements biogears::SEPatientAction.

void biogears::SEInfection::Unload ( CDM::InfectionData &  data) const
protectedvirtual

Member Data Documentation

std::string biogears::SEInfection::m_Location
protected
SEScalarMassPerVolume* biogears::SEInfection::m_MinimumInhibitoryConcentration
protected
CDM::enumInfectionSeverity::value biogears::SEInfection::m_Severity
protected