biogears::Gastrointestinal Member List

This is the complete list of members for biogears::Gastrointestinal, including all inherited members.

AbsorbMeal(double duration_s)	biogears::Gastrointestinal	protected
AbsorbNutrients()	biogears::Gastrointestinal	protected
AbsorbNutrients(double duration_s)	biogears::Gastrointestinal	protected
AtSteadyState() override	biogears::Gastrointestinal	virtual
BioGears class	biogears::Gastrointestinal	friend
BioGearsEngineTest class	biogears::Gastrointestinal	friend
ChymeSecretion()	biogears::Gastrointestinal	protected
classname() const override	biogears::Gastrointestinal	inlinevirtual
Clear() override	biogears::Gastrointestinal	virtual
Debug(const char *msg, const char *origin="") const	biogears::Loggable	protectedvirtual
Debug(const std::string &msg, const std::string &origin=empty) const	biogears::Loggable	protectedvirtual
Debug(std::ostream &msg, const std::string &origin=empty) const	biogears::Loggable	protectedvirtual
DigestNutrient()	biogears::Gastrointestinal	protected
empty	biogears::Loggable	static
empty_cStr	biogears::Loggable	static
Error(const char *msg, const char *origin="") const	biogears::Loggable	protectedvirtual
Error(const std::string msg, const std::string origin=empty) const	biogears::Loggable	protectedvirtual
Error(std::ostream &msg, const std::string &origin=empty) const	biogears::Loggable	protectedvirtual
Fatal(const char *msg, const char *origin="") const	biogears::Loggable	protectedvirtual
Fatal(const std::string &msg, const std::string &origin=empty) const	biogears::Loggable	protectedvirtual
Fatal(std::ostream &msg, const std::string &origin=empty) const	biogears::Loggable	protectedvirtual
GastricSecretion(double duration_s)	biogears::Gastrointestinal	protected
Gastrointestinal(BioGears &bg)	biogears::Gastrointestinal	protected
GetChymeAbsorptionRate()	biogears::SEGastrointestinalSystem
GetChymeAbsorptionRate(const VolumePerTimeUnit &unit) const	biogears::SEGastrointestinalSystem
GetDrugTransitState(const SESubstance *sub)	biogears::SEGastrointestinalSystem
GetDrugTransitStates()	biogears::SEGastrointestinalSystem
GetLogger() const	biogears::Loggable	virtual
GetPhysiologyRequestGraph() const override	biogears::SEGastrointestinalSystem	virtual
GetScalar(const char *name) override	biogears::SEGastrointestinalSystem	virtual
GetScalar(const std::string &name) override	biogears::SEGastrointestinalSystem	virtual
biogears::SESystem::GetScalar(const char *name, std::vector< SESystem * > *systems)	biogears::SESystem	static
biogears::SESystem::GetScalar(const std::string &name, std::vector< SESystem * > *systems)	biogears::SESystem	static
GetStomachContents()	biogears::SEGastrointestinalSystem
GetStomachContents() const	biogears::SEGastrointestinalSystem
HasChymeAbsorptionRate() const	biogears::SEGastrointestinalSystem
hash_code() const override	biogears::Gastrointestinal	inlinevirtual
HasStomachContents() const	biogears::SEGastrointestinalSystem
Info(const char *msg, const char *origin="") const	biogears::Loggable	protectedvirtual
Info(const std::string &msg, const std::string &origin=empty) const	biogears::Loggable	protectedvirtual
Info(std::ostream &msg, const std::string &origin=empty) const	biogears::Loggable	protectedvirtual
Initialize() override	biogears::Gastrointestinal	virtual
Load(const CDM::BioGearsGastrointestinalSystemData &in)	biogears::Gastrointestinal	virtual
biogears::SEGastrointestinalSystem::Load(const CDM::GastrointestinalSystemData &in)	biogears::SEGastrointestinalSystem
biogears::SESystem::Load(const CDM::SystemData &in)	biogears::SESystem
LoadState()	biogears::BioGearsSystem	inlineprotectedvirtual
Loggable()	biogears::Loggable
Loggable(Logger *log)	biogears::Loggable
m_CalciumDigestionRate	biogears::Gastrointestinal	protected
m_ChymeAbsorptionRate	biogears::SEGastrointestinalSystem	protected
m_ConsumeRate	biogears::Gastrointestinal	protected
m_data	biogears::Gastrointestinal	protected
m_DecrementNutrients	biogears::Gastrointestinal	protected
m_DrugTransitStates	biogears::SEGastrointestinalSystem	protected
m_dT_s	biogears::Gastrointestinal	protected
m_EnterocyteVolumeFraction	biogears::Gastrointestinal	protected
m_GItoCVPath	biogears::Gastrointestinal	protected
m_GutE3ToGroundPath	biogears::Gastrointestinal	protected
m_InitialSubstanceMasses_ug	biogears::Gastrointestinal	protected
m_Logger	biogears::Loggable	protected
m_Lymph	biogears::Gastrointestinal	protected
m_LymphTriacylglycerol	biogears::Gastrointestinal	protected
m_secretionRate_mL_Per_s	biogears::Gastrointestinal	protected
m_SmallIntestineChyme	biogears::Gastrointestinal	protected
m_SmallIntestineChymeAlbumin	biogears::Gastrointestinal	protected
m_SmallIntestineChymeAminoAcids	biogears::Gastrointestinal	protected
m_SmallIntestineChymeCalcium	biogears::Gastrointestinal	protected
m_SmallIntestineChymeGlucose	biogears::Gastrointestinal	protected
m_SmallIntestineChymeSodium	biogears::Gastrointestinal	protected
m_SmallIntestineChymeTriacylglycerol	biogears::Gastrointestinal	protected
m_SmallIntestineChymeUrea	biogears::Gastrointestinal	protected
m_smallIntestineVascularAminoAcids	biogears::Gastrointestinal	protected
m_SmallIntestineVascularCalcium	biogears::Gastrointestinal	protected
m_smallIntestineVascularGlucose	biogears::Gastrointestinal	protected
m_SmallIntestineVascularSodium	biogears::Gastrointestinal	protected
m_smallintestineVAscularTriacylglycerol	biogears::Gastrointestinal	protected
m_ss	biogears::SESystem	protected
m_StomachContents	biogears::SEGastrointestinalSystem	protected
m_TransitBileSalts_mM	biogears::Gastrointestinal	protected
m_TransitPH	biogears::Gastrointestinal	protected
m_TransitRate_Per_s	biogears::Gastrointestinal	protected
m_TransitSurfaceArea_cm2	biogears::Gastrointestinal	protected
m_TransitVolume_mL	biogears::Gastrointestinal	protected
m_vSmallIntestine	biogears::Gastrointestinal	protected
m_WaterDigestionRate	biogears::Gastrointestinal	protected
make_unique(BioGears &bg) -> std::unique_ptr< Gastrointestinal >	biogears::Gastrointestinal	protectedstatic
NewDrugTransitState(const SESubstance *sub)	biogears::SEGastrointestinalSystem
PostProcess() override	biogears::Gastrointestinal	virtual
PreProcess() override	biogears::Gastrointestinal	virtual
Process() override	biogears::Gastrointestinal	virtual
ProcessDrugCAT()	biogears::Gastrointestinal	protected
RemoveStomachContents()	biogears::SEGastrointestinalSystem
SEGastrointestinalSystem(Logger *logger)	biogears::SEGastrointestinalSystem
SESystem(Logger *logger)	biogears::SESystem
SetUp() override	biogears::Gastrointestinal	protectedvirtual
TypeHash()	biogears::Gastrointestinal	inlinestatic
TypeTag()	biogears::Gastrointestinal	inlinestatic
Unload() const override	biogears::Gastrointestinal	virtual
Unload(CDM::BioGearsGastrointestinalSystemData &data) const	biogears::Gastrointestinal	protectedvirtual
biogears::SEGastrointestinalSystem::Unload(CDM::GastrointestinalSystemData &data) const	biogears::SEGastrointestinalSystem	protected
biogears::SESystem::Unload(CDM::SystemData &data) const	biogears::SESystem	protected
Warning(const char *msg, const char *origin="") const	biogears::Loggable	protectedvirtual
Warning(const std::string &msg, const std::string &origin=empty) const	biogears::Loggable	protectedvirtual
Warning(std::ostream &msg, const std::string &origin=empty) const	biogears::Loggable	protectedvirtual
~Gastrointestinal() override	biogears::Gastrointestinal	virtual
~Loggable()	biogears::Loggable	virtual
~SEGastrointestinalSystem() override	biogears::SEGastrointestinalSystem
~SESystem()	biogears::SESystem	virtual