| Clear() override | biogears::SEFluidCompartmentLink< SEGasTransportEdge, SEGasTransportVertex, SEGasCompartment > | virtual |
| Debug(const char *msg, const char *origin="") const | biogears::Loggable | protectedvirtual |
| Debug(const std::string &msg, const std::string &origin=empty) const | biogears::Loggable | protectedvirtual |
| Debug(std::ostream &msg, const std::string &origin=empty) const | biogears::Loggable | protectedvirtual |
| empty | biogears::Loggable | static |
| empty_cStr | biogears::Loggable | static |
| Error(const char *msg, const char *origin="") const | biogears::Loggable | protectedvirtual |
| Error(const std::string msg, const std::string origin=empty) const | biogears::Loggable | protectedvirtual |
| Error(std::ostream &msg, const std::string &origin=empty) const | biogears::Loggable | protectedvirtual |
| Fatal(const char *msg, const char *origin="") const | biogears::Loggable | protectedvirtual |
| Fatal(const std::string &msg, const std::string &origin=empty) const | biogears::Loggable | protectedvirtual |
| Fatal(std::ostream &msg, const std::string &origin=empty) const | biogears::Loggable | protectedvirtual |
| GetFlow() | biogears::SEFluidCompartmentLink< SEGasTransportEdge, SEGasTransportVertex, SEGasCompartment > | virtual |
| GetFlow(const VolumePerTimeUnit &unit) const | biogears::SEFluidCompartmentLink< SEGasTransportEdge, SEGasTransportVertex, SEGasCompartment > | virtual |
| GetFlux() override | biogears::SEFluidCompartmentLink< SEGasTransportEdge, SEGasTransportVertex, SEGasCompartment > | inlineprotectedvirtual |
| GetFlux(const VolumePerTimeUnit &unit) const | biogears::SEFluidCompartmentLink< SEGasTransportEdge, SEGasTransportVertex, SEGasCompartment > | inlineprotectedvirtual |
| GetLogger() const | biogears::Loggable | virtual |
| GetName() const override | biogears::SEFluidCompartmentLink< SEGasTransportEdge, SEGasTransportVertex, SEGasCompartment > | virtual |
| GetName_cStr() const override | biogears::SEFluidCompartmentLink< SEGasTransportEdge, SEGasTransportVertex, SEGasCompartment > | virtual |
| GetPath() | biogears::SEFluidCompartmentLink< SEGasTransportEdge, SEGasTransportVertex, SEGasCompartment > | inlinevirtual |
| GetScalar(const char *name) override | biogears::SEFluidCompartmentLink< SEGasTransportEdge, SEGasTransportVertex, SEGasCompartment > | virtual |
| GetScalar(const std::string &name) override | biogears::SEFluidCompartmentLink< SEGasTransportEdge, SEGasTransportVertex, SEGasCompartment > | virtual |
| GetSourceCompartment() | biogears::SEFluidCompartmentLink< SEGasTransportEdge, SEGasTransportVertex, SEGasCompartment > | inlinevirtual |
| GetSourceVertex() override | biogears::SEFluidCompartmentLink< SEGasTransportEdge, SEGasTransportVertex, SEGasCompartment > | inlineprotectedvirtual |
| GetTargetCompartment() | biogears::SEFluidCompartmentLink< SEGasTransportEdge, SEGasTransportVertex, SEGasCompartment > | inlinevirtual |
| GetTargetVertex() override | biogears::SEFluidCompartmentLink< SEGasTransportEdge, SEGasTransportVertex, SEGasCompartment > | inlineprotectedvirtual |
| HasFlow() const | biogears::SEFluidCompartmentLink< SEGasTransportEdge, SEGasTransportVertex, SEGasCompartment > | virtual |
| HasFlux() const override | biogears::SEFluidCompartmentLink< SEGasTransportEdge, SEGasTransportVertex, SEGasCompartment > | inlineprotectedvirtual |
| HasPath() | biogears::SEFluidCompartmentLink< SEGasTransportEdge, SEGasTransportVertex, SEGasCompartment > | inlinevirtual |
| Info(const char *msg, const char *origin="") const | biogears::Loggable | protectedvirtual |
| Info(const std::string &msg, const std::string &origin=empty) const | biogears::Loggable | protectedvirtual |
| Info(std::ostream &msg, const std::string &origin=empty) const | biogears::Loggable | protectedvirtual |
| Load(const CDM::FluidCompartmentLinkData &in, SECircuitManager *circuits=nullptr) | biogears::SEFluidCompartmentLink< SEGasTransportEdge, SEGasTransportVertex, SEGasCompartment > | virtual |
| biogears::SECompartmentLink::Load(const CDM::CompartmentLinkData &in, SECircuitManager *circuits=nullptr) | biogears::SECompartmentLink | virtual |
| Loggable() | biogears::Loggable | |
| Loggable(Logger *log) | biogears::Loggable | |
| m_Flow | biogears::SEFluidCompartmentLink< SEGasTransportEdge, SEGasTransportVertex, SEGasCompartment > | protected |
| m_Logger | biogears::Loggable | protected |
| m_Name | biogears::SECompartmentLink | protected |
| m_Path | biogears::SEFluidCompartmentLink< SEGasTransportEdge, SEGasTransportVertex, SEGasCompartment > | protected |
| m_SourceCmpt | biogears::SEFluidCompartmentLink< SEGasTransportEdge, SEGasTransportVertex, SEGasCompartment > | protected |
| m_SourceVertex | biogears::SEFluidCompartmentLink< SEGasTransportEdge, SEGasTransportVertex, SEGasCompartment > | protected |
| m_TargetCmpt | biogears::SEFluidCompartmentLink< SEGasTransportEdge, SEGasTransportVertex, SEGasCompartment > | protected |
| m_TargetVertex | biogears::SEFluidCompartmentLink< SEGasTransportEdge, SEGasTransportVertex, SEGasCompartment > | protected |
| MapPath(SEFluidCircuitPath &path) | biogears::SEFluidCompartmentLink< SEGasTransportEdge, SEGasTransportVertex, SEGasCompartment > | inlinevirtual |
| RemovePath() | biogears::SEFluidCompartmentLink< SEGasTransportEdge, SEGasTransportVertex, SEGasCompartment > | inlinevirtual |
| SECompartmentLink(const char *name, Logger *logger) | biogears::SECompartmentLink | protected |
| SECompartmentLink(const std::string &name, Logger *logger) | biogears::SECompartmentLink | protected |
| SECompartmentManager class | biogears::SEGasCompartmentLink | friend |
| SEFluidCompartmentLink(CompartmentType &src, CompartmentType &tgt, const char *name) | biogears::SEFluidCompartmentLink< SEGasTransportEdge, SEGasTransportVertex, SEGasCompartment > | protected |
| SEFluidCompartmentLink(CompartmentType &src, CompartmentType &tgt, const std::string &name) | biogears::SEFluidCompartmentLink< SEGasTransportEdge, SEGasTransportVertex, SEGasCompartment > | protected |
| SEGasCompartmentLink(SEGasCompartment &src, SEGasCompartment &tgt, const char *name) | biogears::SEGasCompartmentLink | protected |
| SEGasCompartmentLink(SEGasCompartment &src, SEGasCompartment &tgt, const std::string &name) | biogears::SEGasCompartmentLink | protected |
| SEGasCompartmentLink()=default | biogears::SEGasCompartmentLink | |
| Unload() override | biogears::SEGasCompartmentLink | virtual |
| SEFluidCompartmentLink< SEGasTransportEdge, SEGasTransportVertex, SEGasCompartment >::Unload(CDM::FluidCompartmentLinkData &data) | biogears::SEFluidCompartmentLink< SEGasTransportEdge, SEGasTransportVertex, SEGasCompartment > | protectedvirtual |
| biogears::SECompartmentLink::Unload(CDM::CompartmentLinkData &data) | biogears::SECompartmentLink | protectedvirtual |
| Warning(const char *msg, const char *origin="") const | biogears::Loggable | protectedvirtual |
| Warning(const std::string &msg, const std::string &origin=empty) const | biogears::Loggable | protectedvirtual |
| Warning(std::ostream &msg, const std::string &origin=empty) const | biogears::Loggable | protectedvirtual |
| ~Loggable() | biogears::Loggable | virtual |
| ~SECompartmentLink() | biogears::SECompartmentLink | virtual |
| ~SEFluidCompartmentLink() | biogears::SEFluidCompartmentLink< SEGasTransportEdge, SEGasTransportVertex, SEGasCompartment > | virtual |
| ~SEGasCompartmentLink()=default | biogears::SEGasCompartmentLink | |
