| AdvanceModelTime(bool appendDataTrack=false) override | biogears::BioGearsEngine | virtual |
| AdvanceModelTime(double time, const TimeUnit &unit=TimeUnit::s, bool appendDataTrack=false) override | biogears::BioGearsEngine | virtual |
| AtSteadyState(EngineState state) | biogears::BioGears | protectedvirtual |
| BioGears(Logger *logger) | biogears::BioGears | |
| BioGears(const std::string &logfileName) | biogears::BioGears | |
| BioGears(Logger *logger, const std::string &working_dir) | biogears::BioGears | |
| BioGears(const std::string &logfileName, const std::string &working_dir) | biogears::BioGears | |
| BioGearsEngine(Logger *logger) | biogears::BioGearsEngine | |
| BioGearsEngine(const std::string &logFileName) | biogears::BioGearsEngine | |
| BioGearsEngine(const char *logFileName) | biogears::BioGearsEngine | |
| BioGearsEngine(Logger *logger, const std::string &working_dir) | biogears::BioGearsEngine | |
| BioGearsEngine(Logger *logger, const char *working_dir) | biogears::BioGearsEngine | |
| BioGearsEngine(const std::string &, const std::string &working_dir) | biogears::BioGearsEngine | |
| BioGearsEngine(const char *, const char *) | biogears::BioGearsEngine | |
| CreateCircuitsAndCompartments() | biogears::BioGears | |
| ForwardFatal(const std::string &msg, const std::string &origin) | biogears::BioGears | protected |
| GetActions() | biogears::BioGears | |
| GetActions() const | biogears::BioGears | |
| GetAirwayMode() | biogears::BioGears | |
| GetAirwayMode() const | biogears::BioGears | |
| GetAnesthesiaMachine() override | biogears::BioGearsEngine | virtual |
| biogears::BioGears::GetAnesthesiaMachine() const | biogears::BioGears | |
| GetBloodChemistry() | biogears::BioGears | |
| GetBloodChemistry() const | biogears::BioGears | |
| GetBloodChemistrySystem() override | biogears::BioGearsEngine | virtual |
| GetCardiovascular() | biogears::BioGears | |
| GetCardiovascular() const | biogears::BioGears | |
| GetCardiovascularSystem() override | biogears::BioGearsEngine | virtual |
| GetCircuits() | biogears::BioGears | |
| GetCircuits() const | biogears::BioGears | |
| GetCompartments() override | biogears::BioGearsEngine | virtual |
| biogears::BioGears::GetCompartments() const | biogears::BioGears | |
| GetConditions() | biogears::BioGears | |
| GetConditions() const | biogears::BioGears | |
| GetConfiguration() override | biogears::BioGearsEngine | virtual |
| biogears::BioGears::GetConfiguration() const | biogears::BioGears | |
| GetDataRequestGraph() const override | biogears::BioGearsEngine | virtual |
| GetDataTrack() | biogears::BioGears | |
| GetDiffusionCalculator() | biogears::BioGears | |
| GetDiffusionCalculator() const | biogears::BioGears | |
| GetDrugs() | biogears::BioGears | |
| GetDrugs() const | biogears::BioGears | |
| GetDrugSystem() override | biogears::BioGearsEngine | virtual |
| GetECG() | biogears::BioGears | |
| GetECG() const | biogears::BioGears | |
| GetElectroCardioGram() override | biogears::BioGearsEngine | virtual |
| GetEndocrine() | biogears::BioGears | |
| GetEndocrine() const | biogears::BioGears | |
| GetEndocrineSystem() override | biogears::BioGearsEngine | virtual |
| GetEnergy() | biogears::BioGears | |
| GetEnergy() const | biogears::BioGears | |
| GetEnergySystem() override | biogears::BioGearsEngine | virtual |
| GetEngineTime() | biogears::BioGears | |
| GetEngineTime() const | biogears::BioGears | |
| GetEngineTrack() override | biogears::BioGearsEngine | virtual |
| GetEnvironment() override | biogears::BioGearsEngine | virtual |
| biogears::BioGears::GetEnvironment() const | biogears::BioGears | |
| GetGastrointestinal() | biogears::BioGears | |
| GetGastrointestinal() const | biogears::BioGears | |
| GetGastrointestinalSystem() override | biogears::BioGearsEngine | virtual |
| GetHepatic() | biogears::BioGears | |
| GetHepatic() const | biogears::BioGears | |
| GetHepaticSystem() override | biogears::BioGearsEngine | virtual |
| GetInhaler() override | biogears::BioGearsEngine | virtual |
| biogears::BioGears::GetInhaler() const | biogears::BioGears | |
| GetIntubation() | biogears::BioGears | |
| GetIntubation() const | biogears::BioGears | |
| GetLogger() override | biogears::BioGearsEngine | virtual |
| biogears::BioGears::GetLogger() const | biogears::BioGears | |
| GetNervous() | biogears::BioGears | |
| GetNervous() const | biogears::BioGears | |
| GetNervousSystem() override | biogears::BioGearsEngine | virtual |
| GetPatient() override | biogears::BioGearsEngine | virtual |
| biogears::BioGears::GetPatient() const | biogears::BioGears | |
| GetPatientAssessment(SEPatientAssessment &assessment) override | biogears::BioGearsEngine | virtual |
| GetRenal() | biogears::BioGears | |
| GetRenal() const | biogears::BioGears | |
| GetRenalSystem() override | biogears::BioGearsEngine | virtual |
| GetRespiratory() | biogears::BioGears | |
| GetRespiratory() const | biogears::BioGears | |
| GetRespiratorySystem() override | biogears::BioGearsEngine | virtual |
| GetSaturationCalculator() | biogears::BioGears | |
| GetSaturationCalculator() const | biogears::BioGears | |
| GetSimulationTime(const TimeUnit &unit) override | biogears::BioGearsEngine | virtual |
| biogears::BioGears::GetSimulationTime() | biogears::BioGears | |
| biogears::BioGears::GetSimulationTime() const | biogears::BioGears | |
| GetState() | biogears::BioGears | |
| GetState() const | biogears::BioGears | |
| GetSubstanceManager() override | biogears::BioGearsEngine | virtual |
| GetSubstances() | biogears::BioGears | |
| GetSubstances() const | biogears::BioGears | |
| GetTimeStep(const TimeUnit &unit) override | biogears::BioGearsEngine | virtual |
| biogears::BioGears::GetTimeStep() | biogears::BioGears | |
| biogears::BioGears::GetTimeStep() const | biogears::BioGears | |
| GetTissue() | biogears::BioGears | |
| GetTissue() const | biogears::BioGears | |
| GetTissueSystem() override | biogears::BioGearsEngine | virtual |
| Initialize(const PhysiologyEngineConfiguration *config) | biogears::BioGears | protected |
| InitializeEngine(const char *patientFile, const std::vector< const SECondition * > *conditions=nullptr, const PhysiologyEngineConfiguration *config=nullptr) override | biogears::BioGearsEngine | virtual |
| InitializeEngine(const std::string &patientFile, const std::vector< const SECondition * > *conditions=nullptr, const PhysiologyEngineConfiguration *config=nullptr) override | biogears::BioGearsEngine | virtual |
| InitializeEngine(const SEPatient &patient, const std::vector< const SECondition * > *conditions=nullptr, const PhysiologyEngineConfiguration *config=nullptr) override | biogears::BioGearsEngine | virtual |
| InitializeEngine(const std::vector< const SECondition * > *conditions=nullptr, const PhysiologyEngineConfiguration *config=nullptr) | biogears::BioGearsEngine | protectedvirtual |
| IsAutoTracking() const override | biogears::BioGearsEngine | virtual |
| IsReady() | biogears::BioGearsEngine | protectedvirtual |
| IsTrackingStabilization() const override | biogears::BioGearsEngine | virtual |
| LoadState(const char *file, const SEScalarTime *simTime=nullptr) override | biogears::BioGearsEngine | virtual |
| LoadState(const std::string &file, const SEScalarTime *simTime=nullptr) override | biogears::BioGearsEngine | virtual |
| LoadState(const CDM::PhysiologyEngineStateData &state, const SEScalarTime *simTime=nullptr) override | biogears::BioGearsEngine | virtual |
| m_Actions | biogears::BioGears | protected |
| m_AirwayMode | biogears::BioGears | protected |
| m_AnesthesiaMachine | biogears::BioGears | protected |
| m_areTrackingStabilization | biogears::BioGearsEngine | protected |
| m_BloodChemistrySystem | biogears::BioGears | protected |
| m_CardiovascularSystem | biogears::BioGears | protected |
| m_Circuits | biogears::BioGears | protected |
| m_Compartments | biogears::BioGears | protected |
| m_Conditions | biogears::BioGears | protected |
| m_Config | biogears::BioGears | protected |
| m_CurrentTime | biogears::BioGears | protected |
| m_DataTrack | biogears::BioGears | protected |
| m_DiffusionCalculator | biogears::BioGears | protected |
| m_DrugSystem | biogears::BioGears | protected |
| m_ECG | biogears::BioGears | protected |
| m_EndocrineSystem | biogears::BioGears | protected |
| m_EnergySystem | biogears::BioGears | protected |
| m_EngineTrack | biogears::BioGearsEngine | protected |
| m_Environment | biogears::BioGears | protected |
| m_EventHandler | biogears::BioGearsEngine | protected |
| m_GastrointestinalSystem | biogears::BioGears | protected |
| m_HepaticSystem | biogears::BioGears | protected |
| m_Inhaler | biogears::BioGears | protected |
| m_Intubation | biogears::BioGears | protected |
| m_isAutoTracking | biogears::BioGearsEngine | protected |
| m_Logger | biogears::BioGears | protected |
| m_logger_self_managed | biogears::BioGears | protected |
| m_NervousSystem | biogears::BioGears | protected |
| m_Patient | biogears::BioGears | protected |
| m_RenalSystem | biogears::BioGears | protected |
| m_RespiratorySystem | biogears::BioGears | protected |
| m_SaturationCalculator | biogears::BioGears | protected |
| m_SimulationTime | biogears::BioGears | protected |
| m_ss | biogears::BioGearsEngine | protected |
| m_State | biogears::BioGears | protected |
| m_Substances | biogears::BioGears | protected |
| m_timeSinceLastDataTrack | biogears::BioGearsEngine | protected |
| m_timeStep_remainder | biogears::BioGearsEngine | protected |
| m_TissueSystem | biogears::BioGears | protected |
| PostProcess() | biogears::BioGears | protected |
| PreProcess() | biogears::BioGears | protected |
| Process() | biogears::BioGears | protected |
| ProcessAction(const SEAction &action) override | biogears::BioGearsEngine | virtual |
| SaveState(const char *file) override | biogears::BioGearsEngine | virtual |
| SaveState(const std::string &file="") override | biogears::BioGearsEngine | virtual |
| SetAirwayMode(CDM::enumBioGearsAirwayMode::value mode) | biogears::BioGears | |
| SetAutoTrackFlag(bool flag) override | biogears::BioGearsEngine | virtual |
| SetEventHandler(SEEventHandler *handler) override | biogears::BioGearsEngine | virtual |
| SetIntubation(CDM::enumOnOff::value s) | biogears::BioGears | |
| SetTrackStabilizationFlag(bool flag) override | biogears::BioGearsEngine | virtual |
| SetUp() | biogears::BioGears | protected |
| SetupAnesthesiaMachine() | biogears::BioGears | protected |
| SetupCardiovascular() | biogears::BioGears | protected |
| SetupCerebral() | biogears::BioGears | protected |
| SetupExternalTemperature() | biogears::BioGears | protected |
| SetupGastrointestinal() | biogears::BioGears | protected |
| SetupInhaler() | biogears::BioGears | protected |
| SetupInternalTemperature() | biogears::BioGears | protected |
| SetupMechanicalVentilator() | biogears::BioGears | protected |
| SetupPatient() | biogears::BioGears | protected |
| SetupRenal() | biogears::BioGears | protected |
| SetupRespiratory() | biogears::BioGears | protected |
| SetupTissue() | biogears::BioGears | protected |
| ~BioGears() | biogears::BioGears | virtual |
| ~BioGearsEngine() override | biogears::BioGearsEngine | virtual |
| ~PhysiologyEngine() | biogears::PhysiologyEngine | inlinevirtual |
